Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC28.23■■■□□ 2.11
CTNND1O60716 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
CTNND1O60716 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CTNND1O60716 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CTNND1O60716 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.22■■■□□ 2.11
CTNND1O60716 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CTNND1O60716 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CTNND1O60716 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CTNND1O60716 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.22■■■□□ 2.11
CTNND1O60716 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC28.22■■■□□ 2.11
CTNND1O60716 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
CTNND1O60716 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CTNND1O60716 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CTNND1O60716 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.21■■■□□ 2.11
CTNND1O60716 AC021242.3-201ENST00000607598 1377 ntBASIC28.21■■■□□ 2.11
CTNND1O60716 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CTNND1O60716 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
CTNND1O60716 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CTNND1O60716 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CTNND1O60716 AC008406.3-201ENST00000620001 1374 ntBASIC28.2■■■□□ 2.1
CTNND1O60716 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC28.19■■■□□ 2.1
CTNND1O60716 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CTNND1O60716 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC28.19■■■□□ 2.1
CTNND1O60716 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CTNND1O60716 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.19■■■□□ 2.1
CTNND1O60716 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
CTNND1O60716 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CTNND1O60716 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
CTNND1O60716 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CTNND1O60716 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CTNND1O60716 KRT16P3-201ENST00000439127 1283 ntBASIC28.17■■■□□ 2.1
CTNND1O60716 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
CTNND1O60716 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC28.17■■■□□ 2.1
CTNND1O60716 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
CTNND1O60716 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CTNND1O60716 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
CTNND1O60716 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
CTNND1O60716 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC28.16■■■□□ 2.1
CTNND1O60716 LSM7-203ENST00000585409 512 ntTSL 2 BASIC28.16■■■□□ 2.1
CTNND1O60716 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.16■■■□□ 2.1
CTNND1O60716 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.16■■■□□ 2.1
CTNND1O60716 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CTNND1O60716 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CTNND1O60716 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC28.15■■■□□ 2.1
CTNND1O60716 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CTNND1O60716 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC28.15■■■□□ 2.1
CTNND1O60716 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC28.15■■■□□ 2.1
CTNND1O60716 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
CTNND1O60716 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CTNND1O60716 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CTNND1O60716 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC28.14■■■□□ 2.1
CTNND1O60716 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
CTNND1O60716 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
CTNND1O60716 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.13■■■□□ 2.09
CTNND1O60716 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.13■■■□□ 2.09
CTNND1O60716 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC28.13■■■□□ 2.09
CTNND1O60716 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CTNND1O60716 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CTNND1O60716 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
CTNND1O60716 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CTNND1O60716 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.12■■■□□ 2.09
CTNND1O60716 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CTNND1O60716 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC28.11■■■□□ 2.09
CTNND1O60716 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CTNND1O60716 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC28.1■■■□□ 2.09
CTNND1O60716 PEMT-206ENST00000435340 960 ntTSL 5 BASIC28.1■■■□□ 2.09
CTNND1O60716 TSPY9P-201ENST00000440215 945 ntBASIC28.1■■■□□ 2.09
CTNND1O60716 TSPY11P-201ENST00000442607 1045 ntBASIC28.1■■■□□ 2.09
CTNND1O60716 AC092028.1-203ENST00000608262 953 ntBASIC28.1■■■□□ 2.09
CTNND1O60716 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
CTNND1O60716 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CTNND1O60716 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CTNND1O60716 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CTNND1O60716 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
CTNND1O60716 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CTNND1O60716 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.09■■■□□ 2.09
CTNND1O60716 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC28.09■■■□□ 2.09
CTNND1O60716 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CTNND1O60716 MIR4281-201ENST00000580852 62 ntBASIC28.09■■■□□ 2.09
CTNND1O60716 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CTNND1O60716 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CTNND1O60716 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CTNND1O60716 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
CTNND1O60716 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CTNND1O60716 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CTNND1O60716 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CTNND1O60716 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CTNND1O60716 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CTNND1O60716 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC28.07■■■□□ 2.08
CTNND1O60716 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CTNND1O60716 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC28.07■■■□□ 2.08
CTNND1O60716 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CTNND1O60716 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.06■■■□□ 2.08
CTNND1O60716 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CTNND1O60716 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC28.06■■■□□ 2.08
CTNND1O60716 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CTNND1O60716 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.06■■■□□ 2.08
CTNND1O60716 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
CTNND1O60716 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC28.05■■■□□ 2.08
CTNND1O60716 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms