Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 AC106739.1-201ENST00000617035 715 ntBASIC19.43■□□□□ 0.7
CUBNO60494 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.43■□□□□ 0.7
CUBNO60494 AL449106.1-201ENST00000608517 1980 ntBASIC19.43■□□□□ 0.7
CUBNO60494 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUBNO60494 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.42■□□□□ 0.7
CUBNO60494 AP002414.2-202ENST00000590929 1450 ntBASIC19.42■□□□□ 0.7
CUBNO60494 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CUBNO60494 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CUBNO60494 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.42■□□□□ 0.7
CUBNO60494 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUBNO60494 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CUBNO60494 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CUBNO60494 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CUBNO60494 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUBNO60494 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.4■□□□□ 0.7
CUBNO60494 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUBNO60494 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUBNO60494 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.4■□□□□ 0.7
CUBNO60494 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.4■□□□□ 0.7
CUBNO60494 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUBNO60494 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.4■□□□□ 0.7
CUBNO60494 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CUBNO60494 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CUBNO60494 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CUBNO60494 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.7
CUBNO60494 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CUBNO60494 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CUBNO60494 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.39■□□□□ 0.69
CUBNO60494 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CUBNO60494 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.39■□□□□ 0.69
CUBNO60494 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CUBNO60494 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUBNO60494 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.38■□□□□ 0.69
CUBNO60494 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.38■□□□□ 0.69
CUBNO60494 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CUBNO60494 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.37■□□□□ 0.69
CUBNO60494 AC120024.1-201ENST00000562672 995 ntBASIC19.37■□□□□ 0.69
CUBNO60494 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CUBNO60494 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.37■□□□□ 0.69
CUBNO60494 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CUBNO60494 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CUBNO60494 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CUBNO60494 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.36■□□□□ 0.69
CUBNO60494 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.36■□□□□ 0.69
CUBNO60494 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.36■□□□□ 0.69
CUBNO60494 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CUBNO60494 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CUBNO60494 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CUBNO60494 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CUBNO60494 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CUBNO60494 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CUBNO60494 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CUBNO60494 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CUBNO60494 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.34■□□□□ 0.69
CUBNO60494 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CUBNO60494 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CUBNO60494 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CUBNO60494 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.34■□□□□ 0.69
CUBNO60494 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CUBNO60494 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.33■□□□□ 0.69
CUBNO60494 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CUBNO60494 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.33■□□□□ 0.69
CUBNO60494 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CUBNO60494 MIR6821-201ENST00000617625 74 ntBASIC19.33■□□□□ 0.69
CUBNO60494 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
CUBNO60494 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.33■□□□□ 0.68
CUBNO60494 BX255925.1-201ENST00000566954 1854 ntBASIC19.33■□□□□ 0.68
CUBNO60494 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CUBNO60494 MIR6724-1-201ENST00000616420 92 ntBASIC19.33■□□□□ 0.68
CUBNO60494 MIR6724-2-201ENST00000616483 92 ntBASIC19.33■□□□□ 0.68
CUBNO60494 MIR6724-4-201ENST00000617390 92 ntBASIC19.33■□□□□ 0.68
CUBNO60494 MIR6724-3-201ENST00000622482 92 ntBASIC19.33■□□□□ 0.68
CUBNO60494 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CUBNO60494 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CUBNO60494 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CUBNO60494 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CUBNO60494 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.32■□□□□ 0.68
CUBNO60494 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.32■□□□□ 0.68
CUBNO60494 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.32■□□□□ 0.68
CUBNO60494 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.32■□□□□ 0.68
CUBNO60494 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.32■□□□□ 0.68
CUBNO60494 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.32■□□□□ 0.68
CUBNO60494 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CUBNO60494 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CUBNO60494 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CUBNO60494 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.32■□□□□ 0.68
CUBNO60494 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUBNO60494 AC090192.1-201ENST00000517740 490 ntBASIC19.31■□□□□ 0.68
CUBNO60494 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.31■□□□□ 0.68
CUBNO60494 AC010997.5-201ENST00000609182 354 ntBASIC19.31■□□□□ 0.68
CUBNO60494 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.31■□□□□ 0.68
CUBNO60494 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.31■□□□□ 0.68
CUBNO60494 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CUBNO60494 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CUBNO60494 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CUBNO60494 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CUBNO60494 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CUBNO60494 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CUBNO60494 MIR4281-201ENST00000580852 62 ntBASIC19.3■□□□□ 0.68
CUBNO60494 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms