Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC31.84■■■□□ 2.69
MSH5O43196 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
MSH5O43196 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
MSH5O43196 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
MSH5O43196 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
MSH5O43196 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
MSH5O43196 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
MSH5O43196 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
MSH5O43196 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.83■■■□□ 2.69
MSH5O43196 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
MSH5O43196 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
MSH5O43196 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
MSH5O43196 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
MSH5O43196 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.69
MSH5O43196 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.82■■■□□ 2.68
MSH5O43196 AC239859.2-201ENST00000444165 318 ntBASIC31.82■■■□□ 2.68
MSH5O43196 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.81■■■□□ 2.68
MSH5O43196 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
MSH5O43196 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
MSH5O43196 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
MSH5O43196 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.81■■■□□ 2.68
MSH5O43196 BX255925.1-201ENST00000566954 1854 ntBASIC31.8■■■□□ 2.68
MSH5O43196 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
MSH5O43196 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.8■■■□□ 2.68
MSH5O43196 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
MSH5O43196 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC31.8■■■□□ 2.68
MSH5O43196 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
MSH5O43196 RNF146-205ENST00000477776 762 ntTSL 3 BASIC31.8■■■□□ 2.68
MSH5O43196 AC098799.1-201ENST00000504752 800 ntBASIC31.8■■■□□ 2.68
MSH5O43196 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
MSH5O43196 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
MSH5O43196 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.8■■■□□ 2.68
MSH5O43196 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.79■■■□□ 2.68
MSH5O43196 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
MSH5O43196 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
MSH5O43196 AC091060.1-201ENST00000623524 1766 ntBASIC31.79■■■□□ 2.68
MSH5O43196 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
MSH5O43196 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.78■■■□□ 2.68
MSH5O43196 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.78■■■□□ 2.68
MSH5O43196 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
MSH5O43196 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.77■■■□□ 2.68
MSH5O43196 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
MSH5O43196 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.77■■■□□ 2.68
MSH5O43196 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
MSH5O43196 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.77■■■□□ 2.68
MSH5O43196 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
MSH5O43196 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
MSH5O43196 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
MSH5O43196 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.67
MSH5O43196 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
MSH5O43196 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
MSH5O43196 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.74■■■□□ 2.67
MSH5O43196 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
MSH5O43196 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.74■■■□□ 2.67
MSH5O43196 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
MSH5O43196 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
MSH5O43196 AC100797.4-201ENST00000631653 1827 ntBASIC31.73■■■□□ 2.67
MSH5O43196 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.73■■■□□ 2.67
MSH5O43196 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
MSH5O43196 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
MSH5O43196 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
MSH5O43196 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC31.72■■■□□ 2.67
MSH5O43196 LSM7-203ENST00000585409 512 ntTSL 2 BASIC31.72■■■□□ 2.67
MSH5O43196 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
MSH5O43196 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
MSH5O43196 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.72■■■□□ 2.67
MSH5O43196 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
MSH5O43196 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
MSH5O43196 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.71■■■□□ 2.67
MSH5O43196 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
MSH5O43196 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
MSH5O43196 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC31.7■■■□□ 2.67
MSH5O43196 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
MSH5O43196 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
MSH5O43196 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.69■■■□□ 2.66
MSH5O43196 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.69■■■□□ 2.66
MSH5O43196 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.69■■■□□ 2.66
MSH5O43196 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC31.69■■■□□ 2.66
MSH5O43196 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.69■■■□□ 2.66
MSH5O43196 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
MSH5O43196 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.68■■■□□ 2.66
MSH5O43196 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
MSH5O43196 AC012183.1-201ENST00000625197 499 ntBASIC31.68■■■□□ 2.66
MSH5O43196 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
MSH5O43196 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
MSH5O43196 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
MSH5O43196 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC31.67■■■□□ 2.66
MSH5O43196 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
MSH5O43196 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
MSH5O43196 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
MSH5O43196 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.66■■■□□ 2.66
MSH5O43196 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
MSH5O43196 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.66■■■□□ 2.66
MSH5O43196 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
MSH5O43196 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC31.65■■■□□ 2.66
MSH5O43196 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
MSH5O43196 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
MSH5O43196 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC31.65■■■□□ 2.66
MSH5O43196 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
MSH5O43196 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms