Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.48■■□□□ 1.35
CDX4O14627 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.48■■□□□ 1.35
CDX4O14627 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDX4O14627 MTDHP2-201ENST00000601468 714 ntBASIC23.48■■□□□ 1.35
CDX4O14627 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.48■■□□□ 1.35
CDX4O14627 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDX4O14627 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.47■■□□□ 1.35
CDX4O14627 ZNRF2P3-201ENST00000424200 374 ntBASIC23.47■■□□□ 1.35
CDX4O14627 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.47■■□□□ 1.35
CDX4O14627 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.47■■□□□ 1.35
CDX4O14627 RARRES2P6-201ENST00000567333 442 ntBASIC23.47■■□□□ 1.35
CDX4O14627 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.47■■□□□ 1.35
CDX4O14627 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDX4O14627 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CDX4O14627 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CDX4O14627 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CDX4O14627 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
CDX4O14627 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
CDX4O14627 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDX4O14627 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CDX4O14627 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.46■■□□□ 1.35
CDX4O14627 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.46■■□□□ 1.35
CDX4O14627 AL512631.2-201ENST00000604634 923 ntBASIC23.46■■□□□ 1.35
CDX4O14627 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.35
CDX4O14627 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDX4O14627 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDX4O14627 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.45■■□□□ 1.34
CDX4O14627 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.45■■□□□ 1.34
CDX4O14627 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CDX4O14627 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDX4O14627 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.44■■□□□ 1.34
CDX4O14627 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.44■■□□□ 1.34
CDX4O14627 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.44■■□□□ 1.34
CDX4O14627 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.43■■□□□ 1.34
CDX4O14627 AL449106.1-201ENST00000608517 1980 ntBASIC23.43■■□□□ 1.34
CDX4O14627 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
CDX4O14627 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
CDX4O14627 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
CDX4O14627 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDX4O14627 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.41■■□□□ 1.34
CDX4O14627 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
CDX4O14627 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.41■■□□□ 1.34
CDX4O14627 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDX4O14627 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.41■■□□□ 1.34
CDX4O14627 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
CDX4O14627 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
CDX4O14627 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDX4O14627 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDX4O14627 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDX4O14627 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.4■■□□□ 1.34
CDX4O14627 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDX4O14627 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDX4O14627 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.4■■□□□ 1.34
CDX4O14627 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.39■■□□□ 1.34
CDX4O14627 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.39■■□□□ 1.34
CDX4O14627 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.34
CDX4O14627 AC026271.2-201ENST00000428091 497 ntBASIC23.39■■□□□ 1.33
CDX4O14627 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.39■■□□□ 1.33
CDX4O14627 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDX4O14627 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CDX4O14627 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDX4O14627 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDX4O14627 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDX4O14627 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDX4O14627 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDX4O14627 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.38■■□□□ 1.33
CDX4O14627 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.38■■□□□ 1.33
CDX4O14627 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.38■■□□□ 1.33
CDX4O14627 AC106739.1-201ENST00000617035 715 ntBASIC23.38■■□□□ 1.33
CDX4O14627 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.38■■□□□ 1.33
CDX4O14627 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDX4O14627 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDX4O14627 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.37■■□□□ 1.33
CDX4O14627 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.37■■□□□ 1.33
CDX4O14627 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.37■■□□□ 1.33
CDX4O14627 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CDX4O14627 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDX4O14627 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDX4O14627 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDX4O14627 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDX4O14627 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.36■■□□□ 1.33
CDX4O14627 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDX4O14627 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CDX4O14627 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDX4O14627 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDX4O14627 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDX4O14627 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDX4O14627 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDX4O14627 PBX2P1-201ENST00000493219 1291 ntBASIC23.35■■□□□ 1.33
CDX4O14627 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDX4O14627 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.35■■□□□ 1.33
CDX4O14627 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.35■■□□□ 1.33
CDX4O14627 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDX4O14627 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
CDX4O14627 AC142381.2-201ENST00000566120 298 ntBASIC23.34■■□□□ 1.33
CDX4O14627 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.34■■□□□ 1.33
CDX4O14627 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CDX4O14627 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
CDX4O14627 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDX4O14627 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms