Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMIM35A0A1B0GVV1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.4■■□□□ 1.82
SMIM35A0A1B0GVV1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.4■■□□□ 1.82
SMIM35A0A1B0GVV1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMIM35A0A1B0GVV1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMIM35A0A1B0GVV1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.39■■□□□ 1.82
SMIM35A0A1B0GVV1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC26.39■■□□□ 1.82
SMIM35A0A1B0GVV1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMIM35A0A1B0GVV1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMIM35A0A1B0GVV1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.82
SMIM35A0A1B0GVV1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.39■■□□□ 1.82
SMIM35A0A1B0GVV1 THA1P-201ENST00000590384 1145 ntBASIC26.39■■□□□ 1.82
SMIM35A0A1B0GVV1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.39■■□□□ 1.82
SMIM35A0A1B0GVV1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SMIM35A0A1B0GVV1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.39■■□□□ 1.81
SMIM35A0A1B0GVV1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMIM35A0A1B0GVV1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC26.38■■□□□ 1.81
SMIM35A0A1B0GVV1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.38■■□□□ 1.81
SMIM35A0A1B0GVV1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMIM35A0A1B0GVV1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC26.38■■□□□ 1.81
SMIM35A0A1B0GVV1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMIM35A0A1B0GVV1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.37■■□□□ 1.81
SMIM35A0A1B0GVV1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMIM35A0A1B0GVV1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
SMIM35A0A1B0GVV1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SMIM35A0A1B0GVV1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.37■■□□□ 1.81
SMIM35A0A1B0GVV1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SMIM35A0A1B0GVV1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMIM35A0A1B0GVV1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMIM35A0A1B0GVV1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SMIM35A0A1B0GVV1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMIM35A0A1B0GVV1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMIM35A0A1B0GVV1 AL592295.1-201ENST00000400984 884 ntBASIC26.36■■□□□ 1.81
SMIM35A0A1B0GVV1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC26.36■■□□□ 1.81
SMIM35A0A1B0GVV1 AC120024.1-201ENST00000562672 995 ntBASIC26.36■■□□□ 1.81
SMIM35A0A1B0GVV1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMIM35A0A1B0GVV1 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.36■■□□□ 1.81
SMIM35A0A1B0GVV1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMIM35A0A1B0GVV1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.35■■□□□ 1.81
SMIM35A0A1B0GVV1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.35■■□□□ 1.81
SMIM35A0A1B0GVV1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SMIM35A0A1B0GVV1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.35■■□□□ 1.81
SMIM35A0A1B0GVV1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.35■■□□□ 1.81
SMIM35A0A1B0GVV1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMIM35A0A1B0GVV1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SMIM35A0A1B0GVV1 BX664725.1-201ENST00000438252 379 ntBASIC26.34■■□□□ 1.81
SMIM35A0A1B0GVV1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMIM35A0A1B0GVV1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMIM35A0A1B0GVV1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
SMIM35A0A1B0GVV1 AL356441.2-201ENST00000443009 864 ntBASIC26.33■■□□□ 1.81
SMIM35A0A1B0GVV1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.33■■□□□ 1.81
SMIM35A0A1B0GVV1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
SMIM35A0A1B0GVV1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMIM35A0A1B0GVV1 KRT125P-201ENST00000546827 989 ntBASIC26.32■■□□□ 1.8
SMIM35A0A1B0GVV1 AC137630.3-201ENST00000607245 391 ntBASIC26.32■■□□□ 1.8
SMIM35A0A1B0GVV1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMIM35A0A1B0GVV1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMIM35A0A1B0GVV1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMIM35A0A1B0GVV1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMIM35A0A1B0GVV1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMIM35A0A1B0GVV1 AC131212.1-201ENST00000613771 668 ntBASIC26.31■■□□□ 1.8
SMIM35A0A1B0GVV1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
SMIM35A0A1B0GVV1 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMIM35A0A1B0GVV1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMIM35A0A1B0GVV1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMIM35A0A1B0GVV1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMIM35A0A1B0GVV1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SMIM35A0A1B0GVV1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.3■■□□□ 1.8
SMIM35A0A1B0GVV1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMIM35A0A1B0GVV1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMIM35A0A1B0GVV1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMIM35A0A1B0GVV1 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMIM35A0A1B0GVV1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SMIM35A0A1B0GVV1 MIR4787-201ENST00000607364 84 ntBASIC26.29■■□□□ 1.8
SMIM35A0A1B0GVV1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMIM35A0A1B0GVV1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMIM35A0A1B0GVV1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMIM35A0A1B0GVV1 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SMIM35A0A1B0GVV1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.28■■□□□ 1.8
SMIM35A0A1B0GVV1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
SMIM35A0A1B0GVV1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMIM35A0A1B0GVV1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMIM35A0A1B0GVV1 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMIM35A0A1B0GVV1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SMIM35A0A1B0GVV1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMIM35A0A1B0GVV1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC26.27■■□□□ 1.8
SMIM35A0A1B0GVV1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.27■■□□□ 1.8
SMIM35A0A1B0GVV1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.27■■□□□ 1.8
SMIM35A0A1B0GVV1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SMIM35A0A1B0GVV1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.27■■□□□ 1.8
SMIM35A0A1B0GVV1 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMIM35A0A1B0GVV1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.27■■□□□ 1.8
SMIM35A0A1B0GVV1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMIM35A0A1B0GVV1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMIM35A0A1B0GVV1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMIM35A0A1B0GVV1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.26■■□□□ 1.79
SMIM35A0A1B0GVV1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMIM35A0A1B0GVV1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.26■■□□□ 1.79
SMIM35A0A1B0GVV1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SMIM35A0A1B0GVV1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms