Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 WHAMMP3-201ENST00000611636 1609 ntBASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00854A0A1B0GVQ3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00854A0A1B0GVQ3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.87■□□□□ 0.93
LINC00854A0A1B0GVQ3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00854A0A1B0GVQ3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00854A0A1B0GVQ3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00854A0A1B0GVQ3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.87■□□□□ 0.93
LINC00854A0A1B0GVQ3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00854A0A1B0GVQ3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00854A0A1B0GVQ3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LINC00854A0A1B0GVQ3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00854A0A1B0GVQ3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC00854A0A1B0GVQ3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00854A0A1B0GVQ3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00854A0A1B0GVQ3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00854A0A1B0GVQ3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00854A0A1B0GVQ3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.85■□□□□ 0.93
LINC00854A0A1B0GVQ3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00854A0A1B0GVQ3 AC135983.2-203ENST00000454486 1613 ntBASIC20.85■□□□□ 0.93
LINC00854A0A1B0GVQ3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
LINC00854A0A1B0GVQ3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00854A0A1B0GVQ3 WHAMMP2-203ENST00000563942 1603 ntBASIC20.83■□□□□ 0.93
LINC00854A0A1B0GVQ3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00854A0A1B0GVQ3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.83■□□□□ 0.93
LINC00854A0A1B0GVQ3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.83■□□□□ 0.93
LINC00854A0A1B0GVQ3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC00854A0A1B0GVQ3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC00854A0A1B0GVQ3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC00854A0A1B0GVQ3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
LINC00854A0A1B0GVQ3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC00854A0A1B0GVQ3 C9orf163-202ENST00000624034 2573 ntBASIC20.83■□□□□ 0.92
LINC00854A0A1B0GVQ3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
LINC00854A0A1B0GVQ3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 DUSP8P5-201ENST00000422884 1815 ntBASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LINC00854A0A1B0GVQ3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LINC00854A0A1B0GVQ3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00854A0A1B0GVQ3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.8■□□□□ 0.92
LINC00854A0A1B0GVQ3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LINC00854A0A1B0GVQ3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00854A0A1B0GVQ3 AC096887.2-201ENST00000623443 1957 ntBASIC20.8■□□□□ 0.92
LINC00854A0A1B0GVQ3 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.8■□□□□ 0.92
LINC00854A0A1B0GVQ3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00854A0A1B0GVQ3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
LINC00854A0A1B0GVQ3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00854A0A1B0GVQ3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00854A0A1B0GVQ3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00854A0A1B0GVQ3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00854A0A1B0GVQ3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00854A0A1B0GVQ3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00854A0A1B0GVQ3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00854A0A1B0GVQ3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LINC00854A0A1B0GVQ3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms