Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TRBV5-4A0A0C4DH59 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRBV5-4A0A0C4DH59 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRBV5-4A0A0C4DH59 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.68■■□□□ 1.38
TRBV5-4A0A0C4DH59 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRBV5-4A0A0C4DH59 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRBV5-4A0A0C4DH59 AC018755.3-202ENST00000596210 929 ntBASIC23.67■■□□□ 1.38
TRBV5-4A0A0C4DH59 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRBV5-4A0A0C4DH59 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.67■■□□□ 1.38
TRBV5-4A0A0C4DH59 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRBV5-4A0A0C4DH59 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRBV5-4A0A0C4DH59 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRBV5-4A0A0C4DH59 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRBV5-4A0A0C4DH59 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.66■■□□□ 1.38
TRBV5-4A0A0C4DH59 MIR6765-201ENST00000614092 87 ntBASIC23.66■■□□□ 1.38
TRBV5-4A0A0C4DH59 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TRBV5-4A0A0C4DH59 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRBV5-4A0A0C4DH59 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TRBV5-4A0A0C4DH59 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-4A0A0C4DH59 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRBV5-4A0A0C4DH59 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRBV5-4A0A0C4DH59 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRBV5-4A0A0C4DH59 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRBV5-4A0A0C4DH59 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
TRBV5-4A0A0C4DH59 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
TRBV5-4A0A0C4DH59 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRBV5-4A0A0C4DH59 AC020928.2-201ENST00000588717 2197 ntBASIC23.62■■□□□ 1.37
TRBV5-4A0A0C4DH59 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TRBV5-4A0A0C4DH59 RPS2P7-201ENST00000447334 885 ntBASIC23.62■■□□□ 1.37
TRBV5-4A0A0C4DH59 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TRBV5-4A0A0C4DH59 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.62■■□□□ 1.37
TRBV5-4A0A0C4DH59 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.61■■□□□ 1.37
TRBV5-4A0A0C4DH59 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRBV5-4A0A0C4DH59 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRBV5-4A0A0C4DH59 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRBV5-4A0A0C4DH59 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.6■■□□□ 1.37
TRBV5-4A0A0C4DH59 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.6■■□□□ 1.37
TRBV5-4A0A0C4DH59 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRBV5-4A0A0C4DH59 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.6■■□□□ 1.37
TRBV5-4A0A0C4DH59 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRBV5-4A0A0C4DH59 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TRBV5-4A0A0C4DH59 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRBV5-4A0A0C4DH59 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRBV5-4A0A0C4DH59 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRBV5-4A0A0C4DH59 AC087393.1-201ENST00000582896 145 ntBASIC23.59■■□□□ 1.37
TRBV5-4A0A0C4DH59 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.59■■□□□ 1.37
TRBV5-4A0A0C4DH59 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRBV5-4A0A0C4DH59 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
TRBV5-4A0A0C4DH59 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRBV5-4A0A0C4DH59 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRBV5-4A0A0C4DH59 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRBV5-4A0A0C4DH59 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.58■■□□□ 1.37
TRBV5-4A0A0C4DH59 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
TRBV5-4A0A0C4DH59 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRBV5-4A0A0C4DH59 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.57■■□□□ 1.36
TRBV5-4A0A0C4DH59 AC004987.1-201ENST00000428627 508 ntBASIC23.57■■□□□ 1.36
TRBV5-4A0A0C4DH59 ATP5G2P3-201ENST00000429083 425 ntBASIC23.57■■□□□ 1.36
TRBV5-4A0A0C4DH59 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.57■■□□□ 1.36
TRBV5-4A0A0C4DH59 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.57■■□□□ 1.36
TRBV5-4A0A0C4DH59 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.57■■□□□ 1.36
TRBV5-4A0A0C4DH59 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TRBV5-4A0A0C4DH59 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBV5-4A0A0C4DH59 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBV5-4A0A0C4DH59 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBV5-4A0A0C4DH59 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.56■■□□□ 1.36
TRBV5-4A0A0C4DH59 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBV5-4A0A0C4DH59 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 SLC6A10P-202ENST00000431994 2058 ntBASIC23.55■■□□□ 1.36
TRBV5-4A0A0C4DH59 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV5-4A0A0C4DH59 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV5-4A0A0C4DH59 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.54■■□□□ 1.36
TRBV5-4A0A0C4DH59 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.54■■□□□ 1.36
TRBV5-4A0A0C4DH59 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.54■■□□□ 1.36
TRBV5-4A0A0C4DH59 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.54■■□□□ 1.36
TRBV5-4A0A0C4DH59 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV5-4A0A0C4DH59 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.54■■□□□ 1.36
TRBV5-4A0A0C4DH59 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV5-4A0A0C4DH59 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.53■■□□□ 1.36
TRBV5-4A0A0C4DH59 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRBV5-4A0A0C4DH59 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRBV5-4A0A0C4DH59 AC012354.3-201ENST00000623734 483 ntBASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms