Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV34A0A0B4J273 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV34A0A0B4J273 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TRAV34A0A0B4J273 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV34A0A0B4J273 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV34A0A0B4J273 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV34A0A0B4J273 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV34A0A0B4J273 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV34A0A0B4J273 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV34A0A0B4J273 LINC01124-201ENST00000409786 2117 ntBASIC18.29■□□□□ 0.52
TRAV34A0A0B4J273 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV34A0A0B4J273 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV34A0A0B4J273 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 CLDN5-201ENST00000403084 2357 ntBASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV34A0A0B4J273 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV34A0A0B4J273 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV34A0A0B4J273 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV34A0A0B4J273 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV34A0A0B4J273 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV34A0A0B4J273 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV34A0A0B4J273 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV34A0A0B4J273 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV34A0A0B4J273 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV34A0A0B4J273 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV34A0A0B4J273 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV34A0A0B4J273 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAV34A0A0B4J273 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
TRAV34A0A0B4J273 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV34A0A0B4J273 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAV34A0A0B4J273 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV34A0A0B4J273 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
TRAV34A0A0B4J273 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 MIR3665-201ENST00000578708 105 ntBASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV34A0A0B4J273 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV34A0A0B4J273 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRAV34A0A0B4J273 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV34A0A0B4J273 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms