Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.54■□□□□ 0.56
TRBV7-1A0A0A6YYK4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRBV7-1A0A0A6YYK4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV7-1A0A0A6YYK4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV7-1A0A0A6YYK4 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV7-1A0A0A6YYK4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV7-1A0A0A6YYK4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.53■□□□□ 0.56
TRBV7-1A0A0A6YYK4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV7-1A0A0A6YYK4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV7-1A0A0A6YYK4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRBV7-1A0A0A6YYK4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV7-1A0A0A6YYK4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV7-1A0A0A6YYK4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.56
TRBV7-1A0A0A6YYK4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRBV7-1A0A0A6YYK4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.52■□□□□ 0.56
TRBV7-1A0A0A6YYK4 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRBV7-1A0A0A6YYK4 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.52■□□□□ 0.55
TRBV7-1A0A0A6YYK4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.52■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRBV7-1A0A0A6YYK4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV7-1A0A0A6YYK4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.51■□□□□ 0.55
TRBV7-1A0A0A6YYK4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV7-1A0A0A6YYK4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
TRBV7-1A0A0A6YYK4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV7-1A0A0A6YYK4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV7-1A0A0A6YYK4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.5■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV7-1A0A0A6YYK4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRBV7-1A0A0A6YYK4 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRBV7-1A0A0A6YYK4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.49■□□□□ 0.55
TRBV7-1A0A0A6YYK4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV7-1A0A0A6YYK4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV7-1A0A0A6YYK4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.48■□□□□ 0.55
TRBV7-1A0A0A6YYK4 AC018755.3-202ENST00000596210 929 ntBASIC18.48■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.48■□□□□ 0.55
TRBV7-1A0A0A6YYK4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV7-1A0A0A6YYK4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.47■□□□□ 0.55
TRBV7-1A0A0A6YYK4 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV7-1A0A0A6YYK4 AL592293.1-201ENST00000502889 1188 ntBASIC18.47■□□□□ 0.55
TRBV7-1A0A0A6YYK4 ABHD17AP5-201ENST00000580133 923 ntBASIC18.47■□□□□ 0.55
TRBV7-1A0A0A6YYK4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
TRBV7-1A0A0A6YYK4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV7-1A0A0A6YYK4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV7-1A0A0A6YYK4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV7-1A0A0A6YYK4 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.46■□□□□ 0.55
TRBV7-1A0A0A6YYK4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV7-1A0A0A6YYK4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.46■□□□□ 0.55
TRBV7-1A0A0A6YYK4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV7-1A0A0A6YYK4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV7-1A0A0A6YYK4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRBV7-1A0A0A6YYK4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV7-1A0A0A6YYK4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV7-1A0A0A6YYK4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
TRBV7-1A0A0A6YYK4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRBV7-1A0A0A6YYK4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TRBV7-1A0A0A6YYK4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRBV7-1A0A0A6YYK4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRBV7-1A0A0A6YYK4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV7-1A0A0A6YYK4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRBV7-1A0A0A6YYK4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV7-1A0A0A6YYK4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.44■□□□□ 0.54
TRBV7-1A0A0A6YYK4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV7-1A0A0A6YYK4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV7-1A0A0A6YYK4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV7-1A0A0A6YYK4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV7-1A0A0A6YYK4 U85056.1-201ENST00000616429 682 ntBASIC18.43■□□□□ 0.54
TRBV7-1A0A0A6YYK4 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV7-1A0A0A6YYK4 AC142381.3-201ENST00000568208 1670 ntBASIC18.43■□□□□ 0.54
TRBV7-1A0A0A6YYK4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV7-1A0A0A6YYK4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV7-1A0A0A6YYK4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV7-1A0A0A6YYK4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV7-1A0A0A6YYK4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.42■□□□□ 0.54
TRBV7-1A0A0A6YYK4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.42■□□□□ 0.54
TRBV7-1A0A0A6YYK4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV7-1A0A0A6YYK4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV7-1A0A0A6YYK4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV7-1A0A0A6YYK4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV7-1A0A0A6YYK4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV7-1A0A0A6YYK4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRBV7-1A0A0A6YYK4 MIR6765-201ENST00000614092 87 ntBASIC18.41■□□□□ 0.54
TRBV7-1A0A0A6YYK4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms