Protein–RNA interactions for Protein: Q9Y4B6

DCAF1, DDB1- and CUL4-associated factor 1, humanhuman

Predictions only

Length 1,507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF1Q9Y4B6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 CLK3P2-201ENST00000427566 1453 ntBASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
DCAF1Q9Y4B6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 NOP2-211ENST00000540228 668 ntTSL 2 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 LINC01115-203ENST00000606068 577 ntBASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 AC018665.1-201ENST00000622927 1362 ntBASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 AMT-232ENST00000636199 1546 ntTSL 5 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 AL162726.2-201ENST00000438986 1017 ntBASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 AC104989.1-201ENST00000519711 778 ntBASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC31.34■■■□□ 2.61
DCAF1Q9Y4B6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 REXO1L6P-201ENST00000603433 1515 ntBASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 AL033527.5-201ENST00000641382 801 ntBASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
DCAF1Q9Y4B6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 AC124283.3-201ENST00000570869 594 ntBASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
DCAF1Q9Y4B6 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC31.31■■■□□ 2.6
DCAF1Q9Y4B6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DCAF1Q9Y4B6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms