Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 AL353135.1-201ENST00000606729 504 ntBASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 AC092364.2-201ENST00000596710 2692 ntBASIC14.69□□□□□ -0.06
RHBDD3Q9Y3P4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ALOX12P2-203ENST00000570921 1945 ntBASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 AC068587.6-202ENST00000641839 5619 ntBASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 AKR1C7P-201ENST00000305623 895 ntBASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RHBDD3Q9Y3P4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 AL590787.1-201ENST00000568856 1315 ntBASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 SAPCD2P3-201ENST00000455031 850 ntBASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 MTDHP4-201ENST00000600287 670 ntBASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RHBDD3Q9Y3P4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms