Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
USP25Q9UHP3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
USP25Q9UHP3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 AC106795.1-205ENST00000512851 1056 ntBASIC19.2■□□□□ 0.66
USP25Q9UHP3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.2■□□□□ 0.66
USP25Q9UHP3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
USP25Q9UHP3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.2■□□□□ 0.66
USP25Q9UHP3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 AL353135.1-201ENST00000606729 504 ntBASIC19.19■□□□□ 0.66
USP25Q9UHP3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
USP25Q9UHP3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.19■□□□□ 0.66
USP25Q9UHP3 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 AL136379.1-201ENST00000623471 2642 ntBASIC19.18■□□□□ 0.66
USP25Q9UHP3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 ARMC10P1-201ENST00000313754 855 ntBASIC19.18■□□□□ 0.66
USP25Q9UHP3 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
USP25Q9UHP3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
USP25Q9UHP3 RBM17P3-201ENST00000417687 1192 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms