Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC008677.1-201ENST00000519230 1561 ntBASIC17.03■□□□□ 0.32
EBF1Q9UH73 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 SPDYE14P-201ENST00000442619 822 ntBASIC17.03■□□□□ 0.32
EBF1Q9UH73 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.03■□□□□ 0.32
EBF1Q9UH73 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EBF1Q9UH73 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 FO538757.1-201ENST00000623083 1397 ntBASIC17.02■□□□□ 0.32
EBF1Q9UH73 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 MIR661-201ENST00000384842 89 ntBASIC17.02■□□□□ 0.32
EBF1Q9UH73 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.02■□□□□ 0.32
EBF1Q9UH73 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 AC008761.3-201ENST00000624803 892 ntBASIC17.02■□□□□ 0.32
EBF1Q9UH73 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
EBF1Q9UH73 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
EBF1Q9UH73 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.02■□□□□ 0.31
EBF1Q9UH73 AL355312.1-201ENST00000407115 2176 ntBASIC17.02■□□□□ 0.31
EBF1Q9UH73 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
EBF1Q9UH73 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
EBF1Q9UH73 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
EBF1Q9UH73 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
EBF1Q9UH73 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.02■□□□□ 0.31
EBF1Q9UH73 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
EBF1Q9UH73 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 UXT-AS1-201ENST00000590504 1525 ntBASIC17.01■□□□□ 0.31
EBF1Q9UH73 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 TREML5P-201ENST00000421694 576 ntBASIC17.01■□□□□ 0.31
EBF1Q9UH73 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 UGT1A2P-201ENST00000454886 866 ntBASIC17.01■□□□□ 0.31
EBF1Q9UH73 SLC25A39P2-201ENST00000537614 270 ntBASIC17.01■□□□□ 0.31
EBF1Q9UH73 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 LINC02560-201ENST00000596379 459 ntBASIC17.01■□□□□ 0.31
EBF1Q9UH73 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
EBF1Q9UH73 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
EBF1Q9UH73 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms