Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PPARGC1AQ9UBK2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 MED15P5-201ENST00000423150 992 ntBASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 AC091167.2-201ENST00000579581 588 ntBASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 AL671883.3-201ENST00000603274 991 ntBASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 AL353732.1-201ENST00000569618 1459 ntBASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PPARGC1AQ9UBK2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 AC007967.2-201ENST00000432613 625 ntBASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 KRT18P3-201ENST00000451602 1288 ntBASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 RNA5SP416-201ENST00000516838 111 ntBASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 AP002490.2-201ENST00000524791 560 ntBASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PPARGC1AQ9UBK2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms