Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 NKAIN1P1-201ENST00000435754 582 ntBASIC15.26■□□□□ 0.03
CHD8Q9HCK8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 AC005357.2-202ENST00000590507 1060 ntBASIC15.26■□□□□ 0.03
CHD8Q9HCK8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 AC020763.4-201ENST00000623414 4170 ntBASIC15.26■□□□□ 0.03
CHD8Q9HCK8 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.26■□□□□ 0.03
CHD8Q9HCK8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 AC016700.1-201ENST00000429424 312 ntBASIC15.25■□□□□ 0.03
CHD8Q9HCK8 AC245884.6-201ENST00000515672 1067 ntBASIC15.25■□□□□ 0.03
CHD8Q9HCK8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 AC074044.1-201ENST00000609673 707 ntBASIC15.25■□□□□ 0.03
CHD8Q9HCK8 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHD8Q9HCK8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.24■□□□□ 0.03
CHD8Q9HCK8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 IMP3P2-201ENST00000489760 475 ntBASIC15.24■□□□□ 0.03
CHD8Q9HCK8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.24■□□□□ 0.03
CHD8Q9HCK8 DGAT2L7P-201ENST00000602462 744 ntBASIC15.24■□□□□ 0.03
CHD8Q9HCK8 AC026979.3-201ENST00000607315 403 ntBASIC15.24■□□□□ 0.03
CHD8Q9HCK8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 SOCS2P1-201ENST00000417727 557 ntBASIC15.23■□□□□ 0.03
CHD8Q9HCK8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHD8Q9HCK8 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms