Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
VPS11Q9H270 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.87■□□□□ 0.29
VPS11Q9H270 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
VPS11Q9H270 AP000867.3-201ENST00000524675 377 ntBASIC16.87■□□□□ 0.29
VPS11Q9H270 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.87■□□□□ 0.29
VPS11Q9H270 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.87■□□□□ 0.29
VPS11Q9H270 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
VPS11Q9H270 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.87■□□□□ 0.29
VPS11Q9H270 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
VPS11Q9H270 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.87■□□□□ 0.29
VPS11Q9H270 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VPS11Q9H270 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VPS11Q9H270 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.86■□□□□ 0.29
VPS11Q9H270 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.86■□□□□ 0.29
VPS11Q9H270 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
VPS11Q9H270 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VPS11Q9H270 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 AC104819.1-201ENST00000504587 486 ntBASIC16.86■□□□□ 0.29
VPS11Q9H270 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
VPS11Q9H270 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.86■□□□□ 0.29
VPS11Q9H270 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 IER3-202ENST00000376377 1350 ntBASIC16.86■□□□□ 0.29
VPS11Q9H270 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.86■□□□□ 0.29
VPS11Q9H270 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VPS11Q9H270 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VPS11Q9H270 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS11Q9H270 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.85■□□□□ 0.29
VPS11Q9H270 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VPS11Q9H270 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS11Q9H270 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS11Q9H270 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 POM121L3P-201ENST00000419331 1163 ntBASIC16.85■□□□□ 0.29
VPS11Q9H270 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.85■□□□□ 0.29
VPS11Q9H270 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.85■□□□□ 0.29
VPS11Q9H270 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.85■□□□□ 0.29
VPS11Q9H270 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.85■□□□□ 0.29
VPS11Q9H270 AC087388.1-201ENST00000571370 1112 ntBASIC16.85■□□□□ 0.29
VPS11Q9H270 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS11Q9H270 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS11Q9H270 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.85■□□□□ 0.29
VPS11Q9H270 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.85■□□□□ 0.29
VPS11Q9H270 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VPS11Q9H270 AC092384.3-202ENST00000564646 2873 ntBASIC16.85■□□□□ 0.29
VPS11Q9H270 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VPS11Q9H270 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VPS11Q9H270 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
VPS11Q9H270 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VPS11Q9H270 AC005052.1-201ENST00000625181 2492 ntBASIC16.85■□□□□ 0.29
VPS11Q9H270 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VPS11Q9H270 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms