Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 AL355355.2-201ENST00000442321 338 ntBASIC13.59□□□□□ -0.23
NKX6-2Q9C056 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SLC25A1P4-201ENST00000567977 778 ntBASIC13.59□□□□□ -0.23
NKX6-2Q9C056 AF186192.3-201ENST00000583427 947 ntBASIC13.59□□□□□ -0.23
NKX6-2Q9C056 AL109923.1-201ENST00000618799 583 ntBASIC13.59□□□□□ -0.23
NKX6-2Q9C056 GAMT-205ENST00000640762 751 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.59□□□□□ -0.23
NKX6-2Q9C056 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX6-2Q9C056 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.58□□□□□ -0.23
NKX6-2Q9C056 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.58□□□□□ -0.23
NKX6-2Q9C056 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NKX6-2Q9C056 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
NKX6-2Q9C056 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
NKX6-2Q9C056 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NKX6-2Q9C056 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
NKX6-2Q9C056 PCDHA3-202ENST00000532566 4594 ntBASIC13.58□□□□□ -0.23
NKX6-2Q9C056 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 AC233263.1-201ENST00000578059 224 ntBASIC13.58□□□□□ -0.24
NKX6-2Q9C056 RN7SL471P-201ENST00000580476 299 ntBASIC13.58□□□□□ -0.24
NKX6-2Q9C056 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NKX6-2Q9C056 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.57□□□□□ -0.24
NKX6-2Q9C056 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms