Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TUBB8P12-201ENST00000308911 1335 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TUBB7P-202ENST00000428444 1305 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TUBB8P7-204ENST00000567960 1332 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ME2P1-201ENST00000426028 1970 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ALOX12P2-203ENST00000570921 1945 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 SLC25A1P3-201ENST00000395415 828 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 MTATP6P19-201ENST00000413797 659 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AC069152.1-201ENST00000438030 544 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TSPY17P-201ENST00000450329 467 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AL162430.1-201ENST00000480705 870 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 IGHV3-52-201ENST00000519770 353 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AF186192.3-201ENST00000583427 947 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 RN7SL121P-201ENST00000584223 273 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AL137784.2-201ENST00000607332 1000 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 AC006058.4-201ENST00000624016 1670 ntBASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC4.53□□□□□ -1.68
LCE3DQ9BYE3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms