Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.17□□□□□ -0.14
HDHD3Q9BSH5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 POM121L3P-201ENST00000419331 1163 ntBASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 MIR5100-201ENST00000579544 119 ntBASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 AC092329.2-201ENST00000598402 547 ntBASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 AL353135.1-201ENST00000606729 504 ntBASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HDHD3Q9BSH5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 AC087388.1-201ENST00000571370 1112 ntBASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 AC010331.1-201ENST00000611423 582 ntBASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.15□□□□□ -0.14
HDHD3Q9BSH5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
HDHD3Q9BSH5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 AL596087.1-201ENST00000400979 1969 ntBASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 SNX33P1-201ENST00000592116 1762 ntBASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 GGT3P-204ENST00000453783 1664 ntBASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
HDHD3Q9BSH5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms