Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.41□□□□□ -0.1
NICN1Q9BSH3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NICN1Q9BSH3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.41□□□□□ -0.1
NICN1Q9BSH3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NICN1Q9BSH3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NICN1Q9BSH3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.41□□□□□ -0.1
NICN1Q9BSH3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 TSPY26P-202ENST00000565928 3884 ntBASIC14.4□□□□□ -0.1
NICN1Q9BSH3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 AP002414.1-201ENST00000391405 1147 ntBASIC14.4□□□□□ -0.1
NICN1Q9BSH3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 RCN1P2-201ENST00000398357 915 ntBASIC14.4□□□□□ -0.1
NICN1Q9BSH3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 MINOS1P3-201ENST00000457048 203 ntBASIC14.4□□□□□ -0.1
NICN1Q9BSH3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 BNIP3P18-201ENST00000593976 575 ntBASIC14.4□□□□□ -0.1
NICN1Q9BSH3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 AL356309.3-201ENST00000624132 1934 ntBASIC14.4□□□□□ -0.1
NICN1Q9BSH3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NICN1Q9BSH3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 SPDYE21P-201ENST00000413323 827 ntBASIC14.39□□□□□ -0.11
NICN1Q9BSH3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 KRT18P1-202ENST00000452408 1331 ntBASIC14.39□□□□□ -0.11
NICN1Q9BSH3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 AC005332.1-201ENST00000577698 1310 ntBASIC14.39□□□□□ -0.11
NICN1Q9BSH3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NICN1Q9BSH3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NICN1Q9BSH3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms