Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 SDHAP3-202ENST00000515467 728 ntBASIC17.69■□□□□ 0.42
RAD9AQ99638 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RAD9AQ99638 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.69■□□□□ 0.42
RAD9AQ99638 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.69■□□□□ 0.42
RAD9AQ99638 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.69■□□□□ 0.42
RAD9AQ99638 AL512343.1-201ENST00000605837 169 ntBASIC17.69■□□□□ 0.42
RAD9AQ99638 AC099568.2-201ENST00000609194 695 ntBASIC17.69■□□□□ 0.42
RAD9AQ99638 AL033527.5-202ENST00000641632 1098 ntBASIC17.69■□□□□ 0.42
RAD9AQ99638 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.69■□□□□ 0.42
RAD9AQ99638 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.69■□□□□ 0.42
RAD9AQ99638 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.69■□□□□ 0.42
RAD9AQ99638 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.69■□□□□ 0.42
RAD9AQ99638 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.69■□□□□ 0.42
RAD9AQ99638 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.69■□□□□ 0.42
RAD9AQ99638 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.69■□□□□ 0.42
RAD9AQ99638 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.69■□□□□ 0.42
RAD9AQ99638 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RAD9AQ99638 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
RAD9AQ99638 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.68■□□□□ 0.42
RAD9AQ99638 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.68■□□□□ 0.42
RAD9AQ99638 AC092658.1-201ENST00000505836 891 ntBASIC17.68■□□□□ 0.42
RAD9AQ99638 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.68■□□□□ 0.42
RAD9AQ99638 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.68■□□□□ 0.42
RAD9AQ99638 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RAD9AQ99638 TPRX2P-201ENST00000535362 881 ntBASIC17.68■□□□□ 0.42
RAD9AQ99638 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.68■□□□□ 0.42
RAD9AQ99638 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.68■□□□□ 0.42
RAD9AQ99638 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.68■□□□□ 0.42
RAD9AQ99638 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.68■□□□□ 0.42
RAD9AQ99638 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.68■□□□□ 0.42
RAD9AQ99638 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RAD9AQ99638 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAD9AQ99638 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 KRT8P12-202ENST00000472924 1397 ntBASIC17.67■□□□□ 0.42
RAD9AQ99638 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.67■□□□□ 0.42
RAD9AQ99638 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.67■□□□□ 0.42
RAD9AQ99638 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAD9AQ99638 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.67■□□□□ 0.42
RAD9AQ99638 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.67■□□□□ 0.42
RAD9AQ99638 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.67■□□□□ 0.42
RAD9AQ99638 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
RAD9AQ99638 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.67■□□□□ 0.42
RAD9AQ99638 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
RAD9AQ99638 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.67■□□□□ 0.42
RAD9AQ99638 AC024267.1-201ENST00000582320 895 ntBASIC17.67■□□□□ 0.42
RAD9AQ99638 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.67■□□□□ 0.42
RAD9AQ99638 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.67■□□□□ 0.42
RAD9AQ99638 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.67■□□□□ 0.42
RAD9AQ99638 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.67■□□□□ 0.42
RAD9AQ99638 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.67■□□□□ 0.42
RAD9AQ99638 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.67■□□□□ 0.42
RAD9AQ99638 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 TUBB8P12-201ENST00000308911 1335 ntBASIC17.67■□□□□ 0.42
RAD9AQ99638 TUBB7P-202ENST00000428444 1305 ntBASIC17.67■□□□□ 0.42
RAD9AQ99638 TUBB8P7-204ENST00000567960 1332 ntBASIC17.67■□□□□ 0.42
RAD9AQ99638 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAD9AQ99638 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAD9AQ99638 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.67■□□□□ 0.42
RAD9AQ99638 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAD9AQ99638 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms