Protein–RNA interactions for Protein: Q99523

SORT1, Sortilin, humanhuman

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1Q99523 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SORT1Q99523 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SORT1Q99523 PCGF3-213ENST00000620529 1899 ntBASIC16.31■□□□□ 0.2
SORT1Q99523 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SORT1Q99523 GPAA1P2-202ENST00000606848 1787 ntBASIC16.31■□□□□ 0.2
SORT1Q99523 AC073347.1-201ENST00000421633 2643 ntBASIC16.31■□□□□ 0.2
SORT1Q99523 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SORT1Q99523 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.31■□□□□ 0.2
SORT1Q99523 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.3■□□□□ 0.2
SORT1Q99523 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.3■□□□□ 0.2
SORT1Q99523 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.3■□□□□ 0.2
SORT1Q99523 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.3■□□□□ 0.2
SORT1Q99523 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SORT1Q99523 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.3■□□□□ 0.2
SORT1Q99523 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.3■□□□□ 0.2
SORT1Q99523 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.3■□□□□ 0.2
SORT1Q99523 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SORT1Q99523 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.3■□□□□ 0.2
SORT1Q99523 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.3■□□□□ 0.2
SORT1Q99523 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.3■□□□□ 0.2
SORT1Q99523 BX005266.1-201ENST00000473402 457 ntBASIC16.3■□□□□ 0.2
SORT1Q99523 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.3■□□□□ 0.2
SORT1Q99523 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 AC074051.2-201ENST00000565115 352 ntBASIC16.3■□□□□ 0.2
SORT1Q99523 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.3■□□□□ 0.2
SORT1Q99523 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 AC092329.2-201ENST00000598402 547 ntBASIC16.3■□□□□ 0.2
SORT1Q99523 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SORT1Q99523 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.3■□□□□ 0.2
SORT1Q99523 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.3■□□□□ 0.2
SORT1Q99523 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.3■□□□□ 0.2
SORT1Q99523 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SORT1Q99523 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.3■□□□□ 0.2
SORT1Q99523 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SORT1Q99523 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SORT1Q99523 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SORT1Q99523 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.29■□□□□ 0.2
SORT1Q99523 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 POU5F1P6-201ENST00000466990 990 ntBASIC16.29■□□□□ 0.2
SORT1Q99523 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.29■□□□□ 0.2
SORT1Q99523 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.29■□□□□ 0.2
SORT1Q99523 MIR5100-201ENST00000579544 119 ntBASIC16.29■□□□□ 0.2
SORT1Q99523 MIR3180-1-201ENST00000580374 94 ntBASIC16.29■□□□□ 0.2
SORT1Q99523 MIR3180-3-201ENST00000584616 94 ntBASIC16.29■□□□□ 0.2
SORT1Q99523 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.29■□□□□ 0.2
SORT1Q99523 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.29■□□□□ 0.2
SORT1Q99523 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.29■□□□□ 0.2
SORT1Q99523 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SORT1Q99523 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.29■□□□□ 0.2
SORT1Q99523 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SORT1Q99523 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SORT1Q99523 NCF1C-201ENST00000438382 1427 ntBASIC16.28■□□□□ 0.2
SORT1Q99523 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 AC022532.1-201ENST00000624563 1728 ntBASIC16.28■□□□□ 0.2
SORT1Q99523 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SORT1Q99523 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SORT1Q99523 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms