Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 AC105233.2-201ENST00000523697 349 ntBASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 AF228730.5-201ENST00000530288 346 ntBASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 LINC01225-203ENST00000563550 1244 ntBASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 AC006538.1-201ENST00000567905 1585 ntBASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.3■□□□□ 0.36
CDK5RAP1Q96SZ6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 AL139384.1-201ENST00000612143 3047 ntBASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 HLA-J-203ENST00000494367 1087 ntBASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 AC025678.2-201ENST00000562061 970 ntBASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 AC027307.2-201ENST00000591252 911 ntBASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 UXT-AS1-201ENST00000590504 1525 ntBASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
CDK5RAP1Q96SZ6 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 AC105020.1-201ENST00000435356 2205 ntBASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDK5RAP1Q96SZ6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.27■□□□□ 0.36
CDK5RAP1Q96SZ6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms