Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 Z83836.1-201ENST00000624605 1642 ntBASIC13.61□□□□□ -0.23
RAB40CQ96S21 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 AC117947.1-201ENST00000427448 529 ntBASIC13.61□□□□□ -0.23
RAB40CQ96S21 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 AC013467.2-201ENST00000605472 835 ntBASIC13.61□□□□□ -0.23
RAB40CQ96S21 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RAB40CQ96S21 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.61□□□□□ -0.23
RAB40CQ96S21 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 GGT3P-204ENST00000453783 1664 ntBASIC13.6□□□□□ -0.23
RAB40CQ96S21 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 RNF152P1-201ENST00000397754 604 ntBASIC13.6□□□□□ -0.23
RAB40CQ96S21 AK4P3-201ENST00000418260 669 ntBASIC13.6□□□□□ -0.23
RAB40CQ96S21 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 TSPY5P-201ENST00000426936 936 ntBASIC13.6□□□□□ -0.23
RAB40CQ96S21 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 KRT8P49-201ENST00000604166 1432 ntBASIC13.6□□□□□ -0.23
RAB40CQ96S21 GGT4P-201ENST00000623672 1708 ntBASIC13.6□□□□□ -0.23
RAB40CQ96S21 AC022532.1-201ENST00000624563 1728 ntBASIC13.6□□□□□ -0.23
RAB40CQ96S21 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RAB40CQ96S21 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB40CQ96S21 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms