Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 AP002490.2-201ENST00000524791 560 ntBASIC15.85■□□□□ 0.13
COL21A1Q96P44 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 AC105339.3-201ENST00000560043 636 ntBASIC15.85■□□□□ 0.13
COL21A1Q96P44 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 MIR1199-201ENST00000621445 119 ntBASIC15.85■□□□□ 0.13
COL21A1Q96P44 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 AC022188.1-201ENST00000620960 1664 ntBASIC15.85■□□□□ 0.13
COL21A1Q96P44 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 AL645728.1-201ENST00000366221 2101 ntBASIC15.85■□□□□ 0.13
COL21A1Q96P44 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
COL21A1Q96P44 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.85■□□□□ 0.13
COL21A1Q96P44 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 KRT18P27-201ENST00000427733 1299 ntBASIC15.84■□□□□ 0.13
COL21A1Q96P44 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 FDX1P1-201ENST00000449115 551 ntBASIC15.84■□□□□ 0.13
COL21A1Q96P44 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 AL590787.1-201ENST00000568856 1315 ntBASIC15.84■□□□□ 0.13
COL21A1Q96P44 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
COL21A1Q96P44 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 AL513523.2-202ENST00000427283 2040 ntBASIC15.84■□□□□ 0.13
COL21A1Q96P44 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
COL21A1Q96P44 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL21A1Q96P44 AC006504.4-201ENST00000592118 1568 ntBASIC15.83■□□□□ 0.13
COL21A1Q96P44 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL21A1Q96P44 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.83■□□□□ 0.13
COL21A1Q96P44 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
COL21A1Q96P44 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.83■□□□□ 0.13
COL21A1Q96P44 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.83■□□□□ 0.13
COL21A1Q96P44 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
COL21A1Q96P44 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
COL21A1Q96P44 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.83■□□□□ 0.12
COL21A1Q96P44 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
COL21A1Q96P44 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms