Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 AL353779.1-201ENST00000434793 351 ntBASIC21.78■■□□□ 1.08
NBPF4Q96M43 U91328.1-201ENST00000437528 223 ntBASIC21.78■■□□□ 1.08
NBPF4Q96M43 AC007274.1-201ENST00000439805 662 ntBASIC21.78■■□□□ 1.08
NBPF4Q96M43 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 AL008721.1-201ENST00000609964 604 ntBASIC21.78■■□□□ 1.08
NBPF4Q96M43 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.78■■□□□ 1.08
NBPF4Q96M43 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NBPF4Q96M43 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF4Q96M43 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF4Q96M43 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF4Q96M43 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 AC044860.1-202ENST00000559481 777 ntBASIC21.77■■□□□ 1.08
NBPF4Q96M43 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NBPF4Q96M43 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF4Q96M43 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF4Q96M43 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NBPF4Q96M43 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
NBPF4Q96M43 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
NBPF4Q96M43 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.07
NBPF4Q96M43 BTBD7P1-201ENST00000447253 1453 ntBASIC21.77■■□□□ 1.07
NBPF4Q96M43 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NBPF4Q96M43 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 RPS19-201ENST00000221975 500 ntTSL 3 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 DGCR5-201ENST00000399539 862 ntBASIC21.76■■□□□ 1.07
NBPF4Q96M43 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 RASL12-203ENST00000434605 982 ntTSL 2 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 CHCHD2P3-201ENST00000603038 451 ntBASIC21.76■■□□□ 1.07
NBPF4Q96M43 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NBPF4Q96M43 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NBPF4Q96M43 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC21.75■■□□□ 1.07
NBPF4Q96M43 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF4Q96M43 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NBPF4Q96M43 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NBPF4Q96M43 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.75■■□□□ 1.07
NBPF4Q96M43 AC060834.1-201ENST00000443027 2032 ntBASIC21.75■■□□□ 1.07
NBPF4Q96M43 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC21.75■■□□□ 1.07
NBPF4Q96M43 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NBPF4Q96M43 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF4Q96M43 AL031731.1-201ENST00000642131 2094 ntBASIC21.75■■□□□ 1.07
NBPF4Q96M43 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF4Q96M43 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF4Q96M43 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NBPF4Q96M43 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NBPF4Q96M43 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms