Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 AC132008.2-207ENST00000454517 770 ntBASIC17.27■□□□□ 0.36
C9orf72Q96LT7 AL662844.1-201ENST00000546340 181 ntBASIC17.27■□□□□ 0.36
C9orf72Q96LT7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 SLC25A6P4-201ENST00000586535 553 ntBASIC17.27■□□□□ 0.36
C9orf72Q96LT7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C9orf72Q96LT7 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.27■□□□□ 0.35
C9orf72Q96LT7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C9orf72Q96LT7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.27■□□□□ 0.35
C9orf72Q96LT7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C9orf72Q96LT7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C9orf72Q96LT7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.27■□□□□ 0.35
C9orf72Q96LT7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
C9orf72Q96LT7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 AL596257.1-201ENST00000641463 2694 ntBASIC17.26■□□□□ 0.35
C9orf72Q96LT7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 AC024909.3-201ENST00000611513 2257 ntBASIC17.26■□□□□ 0.35
C9orf72Q96LT7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 PMPCAP1-201ENST00000508114 1576 ntBASIC17.26■□□□□ 0.35
C9orf72Q96LT7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
C9orf72Q96LT7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 AC105917.1-201ENST00000506637 2539 ntBASIC17.25■□□□□ 0.35
C9orf72Q96LT7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 MRPL3P1-201ENST00000400109 1033 ntBASIC17.25■□□□□ 0.35
C9orf72Q96LT7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C9orf72Q96LT7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms