Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 PDPK2P-202ENST00000562415 1191 ntBASIC14.69□□□□□ -0.06
TMEM54Q969K7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 PCDHB19P-201ENST00000570871 2371 ntBASIC14.69□□□□□ -0.06
TMEM54Q969K7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TMEM54Q969K7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TMEM54Q969K7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 AC092474.2-201ENST00000424288 719 ntBASIC14.68□□□□□ -0.06
TMEM54Q969K7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 AC074386.1-202ENST00000463561 864 ntBASIC14.68□□□□□ -0.06
TMEM54Q969K7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 AL513190.1-201ENST00000621254 727 ntBASIC14.68□□□□□ -0.06
TMEM54Q969K7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TMEM54Q969K7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.68□□□□□ -0.06
TMEM54Q969K7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.67□□□□□ -0.06
TMEM54Q969K7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TMEM54Q969K7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms