Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 BX088651.3-201ENST00000418155 352 ntBASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 AC108724.1-201ENST00000481669 352 ntBASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SYNE2Q8WXH0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 HNRNPABP1-201ENST00000406003 734 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 HSPB1P2-201ENST00000448722 546 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AC116345.2-201ENST00000512837 523 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 RN7SL713P-201ENST00000582127 302 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AC100757.4-201ENST00000626934 759 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AL121949.1-201ENST00000402043 968 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AP006248.1-201ENST00000610471 67 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AC106827.1-201ENST00000366454 431 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AL391069.4-201ENST00000609583 481 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 CD8B2-202ENST00000417670 633 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 RBM8B-201ENST00000555532 525 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 COX20P1-201ENST00000366529 357 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 FAM197Y6-201ENST00000420524 766 ntBASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC6.59□□□□□ -1.35
SYNE2Q8WXH0 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SYNE2Q8WXH0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC6.59□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms