Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMIM4Q8WVI0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 FAM8A6P-201ENST00000407496 1135 ntBASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 AC090192.1-201ENST00000517740 490 ntBASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 MIR4651-201ENST00000582622 73 ntBASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 AL671710.1-201ENST00000610245 2349 ntBASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SMIM4Q8WVI0 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 AC016027.1-202ENST00000607927 1699 ntBASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 AP002414.1-201ENST00000391405 1147 ntBASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 KLF4P1-201ENST00000412782 1185 ntBASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 Z99916.2-201ENST00000604037 246 ntBASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 AC069224.1-201ENST00000566372 1715 ntBASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 REXO1L8P-201ENST00000604378 1897 ntBASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.31□□□□□ -0.12
SMIM4Q8WVI0 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMIM4Q8WVI0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms