Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 BX842568.4-201ENST00000421222 227 ntBASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 PCDH8P1-201ENST00000428983 2773 ntBASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 KRT8P39-201ENST00000396270 1433 ntBASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 GGT4P-201ENST00000623672 1708 ntBASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SMARCC2Q8TAQ2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 KRT18P13-201ENST00000400056 1290 ntBASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 AC005052.1-201ENST00000625181 2492 ntBASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 AL391005.1-201ENST00000623953 2435 ntBASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCC2Q8TAQ2 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 AC002347.1-201ENST00000569543 541 ntBASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 AC010507.1-201ENST00000633895 436 ntBASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCC2Q8TAQ2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 AL031731.1-201ENST00000642131 2094 ntBASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCC2Q8TAQ2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms