Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 MAX-217ENST00000557277 728 ntTSL 3 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 C2orf69P4-201ENST00000565394 541 ntBASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 AC004817.3-201ENST00000602957 2129 ntBASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 AC068587.9-201ENST00000641814 219 ntBASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 AC092117.1-201ENST00000621230 3250 ntBASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SPTSSBQ8NFR3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 AC092068.3-201ENST00000587894 2016 ntBASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 AC133963.1-201ENST00000504166 1679 ntBASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 NFYC-AS1-201ENST00000606277 1687 ntBASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CSPG4P12-201ENST00000558282 4853 ntBASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 MTMR9LP-203ENST00000426597 1545 ntBASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 PCDHA4-204ENST00000618834 10557 ntBASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 AP000593.1-201ENST00000393668 712 ntBASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 AL589743.5-201ENST00000616611 1050 ntBASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 TNC-203ENST00000423613 6281 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SPTSSBQ8NFR3 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms