Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 CYMP-203ENST00000474680 1263 ntBASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
CCDC33Q8N5R6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 AC023141.13-201ENST00000604991 943 ntBASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 AC106028.4-201ENST00000614509 607 ntBASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 AC007064.4-201ENST00000637740 555 ntBASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCDC33Q8N5R6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 PCDH8P1-201ENST00000428983 2773 ntBASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 AL645939.2-201ENST00000427340 991 ntBASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 AC124947.2-201ENST00000547118 1133 ntBASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCDC33Q8N5R6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCDC33Q8N5R6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC33Q8N5R6 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCDC33Q8N5R6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCDC33Q8N5R6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCDC33Q8N5R6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms