Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.56□□□□□ -0.08
LRRTM1Q86UE6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 AL512652.2-201ENST00000625156 1716 ntBASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
LRRTM1Q86UE6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 RCN1P2-201ENST00000398357 915 ntBASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 AC022616.7-201ENST00000525383 220 ntBASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 AL136038.3-201ENST00000561909 1096 ntBASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 NTF6B-201ENST00000591913 560 ntBASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 AL590787.1-201ENST00000568856 1315 ntBASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 SIGLEC16-201ENST00000599858 1437 ntBASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
LRRTM1Q86UE6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms