Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CACNA2D4Q7Z3S7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CACNA2D4Q7Z3S7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.39■□□□□ 0.54
CACNA2D4Q7Z3S7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.39■□□□□ 0.54
CACNA2D4Q7Z3S7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
CACNA2D4Q7Z3S7 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CACNA2D4Q7Z3S7 FLJ16779-201ENST00000612722 7638 ntBASIC18.39■□□□□ 0.54
CACNA2D4Q7Z3S7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 AP002414.1-201ENST00000391405 1147 ntBASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 BX842568.4-201ENST00000421222 227 ntBASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CACNA2D4Q7Z3S7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 AC008741.2-201ENST00000612792 3115 ntBASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 DUX4L17-201ENST00000557360 1267 ntBASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.38■□□□□ 0.53
CACNA2D4Q7Z3S7 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CACNA2D4Q7Z3S7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CACNA2D4Q7Z3S7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CACNA2D4Q7Z3S7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CACNA2D4Q7Z3S7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms