Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC12.68□□□□□ -0.38
MRPL54Q6P161 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.68□□□□□ -0.38
MRPL54Q6P161 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.68□□□□□ -0.38
MRPL54Q6P161 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
MRPL54Q6P161 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL54Q6P161 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.68□□□□□ -0.38
MRPL54Q6P161 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL54Q6P161 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL54Q6P161 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
MRPL54Q6P161 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL54Q6P161 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.68□□□□□ -0.38
MRPL54Q6P161 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL54Q6P161 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC12.68□□□□□ -0.38
MRPL54Q6P161 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL54Q6P161 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL54Q6P161 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.68□□□□□ -0.38
MRPL54Q6P161 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
MRPL54Q6P161 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL54Q6P161 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MRPL54Q6P161 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 MYCLP1-201ENST00000372451 1075 ntBASIC12.67□□□□□ -0.38
MRPL54Q6P161 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 SEC1P-202ENST00000473944 940 ntBASIC12.67□□□□□ -0.38
MRPL54Q6P161 AC026366.1-201ENST00000488803 879 ntBASIC12.67□□□□□ -0.38
MRPL54Q6P161 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 IKBKGP1-201ENST00000612193 1073 ntBASIC12.67□□□□□ -0.38
MRPL54Q6P161 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 AC138035.3-201ENST00000622706 2791 ntBASIC12.67□□□□□ -0.38
MRPL54Q6P161 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.67□□□□□ -0.38
MRPL54Q6P161 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
MRPL54Q6P161 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 TUBB8P12-201ENST00000308911 1335 ntBASIC12.66□□□□□ -0.38
MRPL54Q6P161 TUBB7P-202ENST00000428444 1305 ntBASIC12.66□□□□□ -0.38
MRPL54Q6P161 TUBB8P7-204ENST00000567960 1332 ntBASIC12.66□□□□□ -0.38
MRPL54Q6P161 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
MRPL54Q6P161 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC12.66□□□□□ -0.38
MRPL54Q6P161 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms