Protein–RNA interactions for Protein: Q5VT98

PRAMEF20, PRAME family member 20, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20Q5VT98 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 ADH5P3-201ENST00000433842 1137 ntBASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 AC109635.5-201ENST00000533593 962 ntBASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 RARRES2P8-201ENST00000566335 367 ntBASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 AL161645.1-201ENST00000622716 1255 ntBASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRAMEF20Q5VT98 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 LINC00895-201ENST00000629028 1637 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 TFAMP1-201ENST00000412727 736 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 SPDYE11-202ENST00000450699 704 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 AL135744.1-201ENST00000565098 629 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 SPDYE9P-201ENST00000570642 692 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 AC022145.2-201ENST00000598203 171 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 AC026120.1-201ENST00000611536 926 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 SPDYE10P-202ENST00000612005 668 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 SPDYE8P-202ENST00000612377 668 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 AC105339.1-204ENST00000636249 355 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 LTB4R2-202ENST00000528054 3092 ntBASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.28■□□□□ 0.04
PRAMEF20Q5VT98 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 AC022211.2-201ENST00000585075 2527 ntBASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.27■□□□□ 0.04
PRAMEF20Q5VT98 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms