Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RAB43P1-201ENST00000561790 589 ntBASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
CDC42BPAQ5VT25 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 AL158212.4-201ENST00000624062 1286 ntBASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 PCGF3-213ENST00000620529 1899 ntBASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC24.84■■□□□ 1.57
CDC42BPAQ5VT25 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 AZGP1P1-201ENST00000411909 902 ntBASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 AL606495.2-201ENST00000605867 535 ntBASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 CLK3P2-201ENST00000427566 1453 ntBASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 HIST1H2BPS3-201ENST00000419683 341 ntBASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 SDHAP3-202ENST00000515467 728 ntBASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 MIR4259-201ENST00000584466 101 ntBASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 AC010319.3-201ENST00000597028 470 ntBASIC24.83■■□□□ 1.57
CDC42BPAQ5VT25 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
CDC42BPAQ5VT25 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC24.83■■□□□ 1.56
CDC42BPAQ5VT25 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC24.83■■□□□ 1.56
CDC42BPAQ5VT25 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 GGT3P-204ENST00000453783 1664 ntBASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 KRT223P-202ENST00000449164 1292 ntBASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 AL139010.1-201ENST00000454878 894 ntBASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 NAA38-206ENST00000576384 424 ntTSL 2 BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 WNT11-204ENST00000621122 789 ntTSL 5 BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CDC42BPAQ5VT25 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 AC011495.1-201ENST00000498085 584 ntBASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 AC141586.5-201ENST00000624546 2050 ntBASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 MIR6069-201ENST00000620069 79 ntBASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CDC42BPAQ5VT25 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CDC42BPAQ5VT25 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms