Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN1Q16799 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN1Q16799 PMS2P4-201ENST00000412466 1052 ntBASIC19.42■□□□□ 0.7
RTN1Q16799 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.42■□□□□ 0.7
RTN1Q16799 AC140658.5-201ENST00000438532 169 ntBASIC19.42■□□□□ 0.7
RTN1Q16799 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.42■□□□□ 0.7
RTN1Q16799 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN1Q16799 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.42■□□□□ 0.7
RTN1Q16799 AL009183.1-201ENST00000603760 355 ntBASIC19.42■□□□□ 0.7
RTN1Q16799 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN1Q16799 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 PMS2P7-201ENST00000506558 1336 ntBASIC19.42■□□□□ 0.7
RTN1Q16799 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.42■□□□□ 0.7
RTN1Q16799 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.42■□□□□ 0.7
RTN1Q16799 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RTN1Q16799 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN1Q16799 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN1Q16799 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
RTN1Q16799 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RTN1Q16799 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.41■□□□□ 0.7
RTN1Q16799 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN1Q16799 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.41■□□□□ 0.7
RTN1Q16799 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.41■□□□□ 0.7
RTN1Q16799 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.41■□□□□ 0.7
RTN1Q16799 AC021097.1-201ENST00000607902 574 ntBASIC19.41■□□□□ 0.7
RTN1Q16799 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RTN1Q16799 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTN1Q16799 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTN1Q16799 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.4■□□□□ 0.7
RTN1Q16799 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RTN1Q16799 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RTN1Q16799 GPAA1P2-202ENST00000606848 1787 ntBASIC19.4■□□□□ 0.7
RTN1Q16799 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.4■□□□□ 0.7
RTN1Q16799 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.4■□□□□ 0.7
RTN1Q16799 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.4■□□□□ 0.7
RTN1Q16799 AC109635.5-201ENST00000533593 962 ntBASIC19.4■□□□□ 0.7
RTN1Q16799 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.4■□□□□ 0.7
RTN1Q16799 AC002347.1-201ENST00000569543 541 ntBASIC19.4■□□□□ 0.7
RTN1Q16799 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RTN1Q16799 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.4■□□□□ 0.7
RTN1Q16799 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RTN1Q16799 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.4■□□□□ 0.7
RTN1Q16799 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTN1Q16799 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.39■□□□□ 0.7
RTN1Q16799 ALOX12P2-203ENST00000570921 1945 ntBASIC19.39■□□□□ 0.7
RTN1Q16799 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN1Q16799 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN1Q16799 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTN1Q16799 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.39■□□□□ 0.69
RTN1Q16799 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.39■□□□□ 0.69
RTN1Q16799 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTN1Q16799 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.39■□□□□ 0.69
RTN1Q16799 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RTN1Q16799 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.39■□□□□ 0.69
RTN1Q16799 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.39■□□□□ 0.69
RTN1Q16799 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.39■□□□□ 0.69
RTN1Q16799 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.39■□□□□ 0.69
RTN1Q16799 AP002472.1-201ENST00000577490 586 ntBASIC19.39■□□□□ 0.69
RTN1Q16799 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms