Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKL1Q00532 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.49■□□□□ 0.23
CDKL1Q00532 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKL1Q00532 PGM5P2-202ENST00000637225 1043 ntBASIC16.49■□□□□ 0.23
CDKL1Q00532 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKL1Q00532 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKL1Q00532 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 NFIC-211ENST00000641145 8399 ntBASIC16.49■□□□□ 0.23
CDKL1Q00532 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 AC024909.3-201ENST00000611513 2257 ntBASIC16.48■□□□□ 0.23
CDKL1Q00532 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDKL1Q00532 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.48■□□□□ 0.23
CDKL1Q00532 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.48■□□□□ 0.23
CDKL1Q00532 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 AC004870.1-201ENST00000315132 882 ntBASIC16.48■□□□□ 0.23
CDKL1Q00532 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.48■□□□□ 0.23
CDKL1Q00532 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
CDKL1Q00532 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.48■□□□□ 0.23
CDKL1Q00532 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.48■□□□□ 0.23
CDKL1Q00532 AC008667.4-201ENST00000607370 168 ntBASIC16.48■□□□□ 0.23
CDKL1Q00532 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 AC023824.1-201ENST00000562945 2975 ntBASIC16.48■□□□□ 0.23
CDKL1Q00532 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.48■□□□□ 0.23
CDKL1Q00532 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDKL1Q00532 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 HLA-A-202ENST00000376806 1854 ntBASIC16.48■□□□□ 0.23
CDKL1Q00532 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDKL1Q00532 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDKL1Q00532 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKL1Q00532 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKL1Q00532 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CDKL1Q00532 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CDKL1Q00532 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDKL1Q00532 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDKL1Q00532 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDKL1Q00532 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKL1Q00532 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CDKL1Q00532 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.47■□□□□ 0.23
CDKL1Q00532 AL450487.1-201ENST00000426799 995 ntBASIC16.47■□□□□ 0.23
CDKL1Q00532 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.47■□□□□ 0.23
CDKL1Q00532 SLC25A6P2-201ENST00000497974 877 ntBASIC16.47■□□□□ 0.23
CDKL1Q00532 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDKL1Q00532 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.47■□□□□ 0.23
CDKL1Q00532 AC105339.3-201ENST00000560043 636 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms