Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.84■□□□□ 0.13
RAE1P78406 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
RAE1P78406 MIR4751-201ENST00000578027 74 ntBASIC15.84■□□□□ 0.13
RAE1P78406 MIR4515-201ENST00000584082 81 ntBASIC15.84■□□□□ 0.13
RAE1P78406 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.84■□□□□ 0.13
RAE1P78406 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAE1P78406 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
RAE1P78406 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAE1P78406 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAE1P78406 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAE1P78406 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RAE1P78406 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RAE1P78406 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.84■□□□□ 0.13
RAE1P78406 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RAE1P78406 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.83■□□□□ 0.13
RAE1P78406 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAE1P78406 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAE1P78406 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAE1P78406 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAE1P78406 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RAE1P78406 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 HMGA1P7-201ENST00000406908 502 ntBASIC15.83■□□□□ 0.12
RAE1P78406 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.83■□□□□ 0.12
RAE1P78406 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
RAE1P78406 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.83■□□□□ 0.12
RAE1P78406 RNA5SP415-201ENST00000517246 115 ntBASIC15.83■□□□□ 0.12
RAE1P78406 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
RAE1P78406 AP001005.1-201ENST00000571755 1248 ntBASIC15.83■□□□□ 0.12
RAE1P78406 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.83■□□□□ 0.12
RAE1P78406 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
RAE1P78406 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.83■□□□□ 0.12
RAE1P78406 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.83■□□□□ 0.12
RAE1P78406 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
RAE1P78406 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.83■□□□□ 0.12
RAE1P78406 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RAE1P78406 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.83■□□□□ 0.12
RAE1P78406 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.83■□□□□ 0.12
RAE1P78406 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.82■□□□□ 0.12
RAE1P78406 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 AL596087.1-201ENST00000400979 1969 ntBASIC15.82■□□□□ 0.12
RAE1P78406 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.82■□□□□ 0.12
RAE1P78406 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.82■□□□□ 0.12
RAE1P78406 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.82■□□□□ 0.12
RAE1P78406 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.82■□□□□ 0.12
RAE1P78406 VN2R19P-201ENST00000442399 1052 ntBASIC15.82■□□□□ 0.12
RAE1P78406 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.82■□□□□ 0.12
RAE1P78406 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.82■□□□□ 0.12
RAE1P78406 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.82■□□□□ 0.12
RAE1P78406 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.82■□□□□ 0.12
RAE1P78406 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.82■□□□□ 0.12
RAE1P78406 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 HLA-A-201ENST00000376802 1334 ntBASIC15.82■□□□□ 0.12
RAE1P78406 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.82■□□□□ 0.12
RAE1P78406 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.82■□□□□ 0.12
RAE1P78406 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
RAE1P78406 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 LINC01144-201ENST00000626198 1710 ntBASIC15.82■□□□□ 0.12
RAE1P78406 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RAE1P78406 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.82■□□□□ 0.12
RAE1P78406 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAE1P78406 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.81■□□□□ 0.12
RAE1P78406 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms