Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PRAMEP78395 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.91■□□□□ 0.3
PRAMEP78395 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.91■□□□□ 0.3
PRAMEP78395 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PRAMEP78395 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEP78395 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEP78395 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 AC006277.1-201ENST00000624348 1610 ntBASIC16.9■□□□□ 0.3
PRAMEP78395 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEP78395 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.9■□□□□ 0.3
PRAMEP78395 HNRNPDP1-201ENST00000439535 754 ntBASIC16.9■□□□□ 0.3
PRAMEP78395 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEP78395 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.9■□□□□ 0.3
PRAMEP78395 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEP78395 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
PRAMEP78395 AL356488.2-201ENST00000602755 427 ntBASIC16.9■□□□□ 0.3
PRAMEP78395 PGM5P2-202ENST00000637225 1043 ntBASIC16.9■□□□□ 0.3
PRAMEP78395 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEP78395 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEP78395 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PRAMEP78395 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEP78395 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEP78395 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEP78395 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.9■□□□□ 0.3
PRAMEP78395 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEP78395 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PRAMEP78395 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
PRAMEP78395 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEP78395 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.9■□□□□ 0.3
PRAMEP78395 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRAMEP78395 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.9■□□□□ 0.3
PRAMEP78395 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PRAMEP78395 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.89■□□□□ 0.3
PRAMEP78395 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.89■□□□□ 0.3
PRAMEP78395 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PRAMEP78395 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEP78395 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEP78395 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRAMEP78395 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PRAMEP78395 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEP78395 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEP78395 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEP78395 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.89■□□□□ 0.29
PRAMEP78395 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEP78395 KRT126P-201ENST00000549467 1181 ntBASIC16.89■□□□□ 0.29
PRAMEP78395 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.89■□□□□ 0.29
PRAMEP78395 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.89■□□□□ 0.29
PRAMEP78395 AC013467.2-201ENST00000605472 835 ntBASIC16.89■□□□□ 0.29
PRAMEP78395 AL031008.1-201ENST00000619963 541 ntBASIC16.89■□□□□ 0.29
PRAMEP78395 AC005593.1-201ENST00000624894 515 ntBASIC16.89■□□□□ 0.29
PRAMEP78395 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.89■□□□□ 0.29
PRAMEP78395 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRAMEP78395 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEP78395 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEP78395 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
PRAMEP78395 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.88■□□□□ 0.29
PRAMEP78395 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRAMEP78395 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEP78395 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PRAMEP78395 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.88■□□□□ 0.29
PRAMEP78395 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms