Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.88□□□□□ -0.51
RPL39P62891 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
RPL39P62891 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.88□□□□□ -0.51
RPL39P62891 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
RPL39P62891 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RPL39P62891 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
RPL39P62891 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.87□□□□□ -0.51
RPL39P62891 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC11.87□□□□□ -0.51
RPL39P62891 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RPL39P62891 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.87□□□□□ -0.51
RPL39P62891 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 AC073347.1-201ENST00000421633 2643 ntBASIC11.87□□□□□ -0.51
RPL39P62891 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 FAM220CP-201ENST00000395253 831 ntBASIC11.87□□□□□ -0.51
RPL39P62891 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC11.87□□□□□ -0.51
RPL39P62891 COX11P1-201ENST00000489116 835 ntBASIC11.87□□□□□ -0.51
RPL39P62891 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.87□□□□□ -0.51
RPL39P62891 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 RNF126P1-202ENST00000569893 925 ntBASIC11.87□□□□□ -0.51
RPL39P62891 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
RPL39P62891 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
RPL39P62891 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.87□□□□□ -0.51
RPL39P62891 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
RPL39P62891 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.87□□□□□ -0.51
RPL39P62891 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 AL161772.1-201ENST00000610494 4412 ntBASIC11.87□□□□□ -0.51
RPL39P62891 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC11.87□□□□□ -0.51
RPL39P62891 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
RPL39P62891 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
RPL39P62891 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
RPL39P62891 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.86□□□□□ -0.51
RPL39P62891 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.86□□□□□ -0.51
RPL39P62891 LINC00895-201ENST00000629028 1637 ntBASIC11.86□□□□□ -0.51
RPL39P62891 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
RPL39P62891 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC11.86□□□□□ -0.51
RPL39P62891 KLF4P1-201ENST00000412782 1185 ntBASIC11.86□□□□□ -0.51
RPL39P62891 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC11.86□□□□□ -0.51
RPL39P62891 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC11.86□□□□□ -0.51
RPL39P62891 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
RPL39P62891 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
RPL39P62891 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms