Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 KRT8P39-201ENST00000396270 1433 ntBASIC15.1■□□□□ 0.01
RPS4XP62701 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.1■□□□□ 0.01
RPS4XP62701 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.1■□□□□ 0.01
RPS4XP62701 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.1■□□□□ 0.01
RPS4XP62701 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 GGT4P-201ENST00000623672 1708 ntBASIC15.1■□□□□ 0.01
RPS4XP62701 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.1■□□□□ 0.01
RPS4XP62701 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.1■□□□□ 0.01
RPS4XP62701 RNA5SP416-201ENST00000516838 111 ntBASIC15.1■□□□□ 0.01
RPS4XP62701 PGAM5P1-201ENST00000518923 814 ntBASIC15.1■□□□□ 0.01
RPS4XP62701 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.1■□□□□ 0.01
RPS4XP62701 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.1■□□□□ 0.01
RPS4XP62701 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.1■□□□□ 0.01
RPS4XP62701 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.1■□□□□ 0.01
RPS4XP62701 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RPS4XP62701 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
RPS4XP62701 AL031731.1-201ENST00000642131 2094 ntBASIC15.1■□□□□ 0.01
RPS4XP62701 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.1■□□□□ 0.01
RPS4XP62701 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RPS4XP62701 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.09■□□□□ 0.01
RPS4XP62701 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RPS4XP62701 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.09■□□□□ 0.01
RPS4XP62701 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RPS4XP62701 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RPS4XP62701 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.09■□□□□ 0.01
RPS4XP62701 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
RPS4XP62701 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RPS4XP62701 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 RPS15P9-201ENST00000494093 319 ntBASIC15.09■□□□□ 0.01
RPS4XP62701 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.09■□□□□ 0.01
RPS4XP62701 AC040169.1-201ENST00000565382 521 ntBASIC15.09■□□□□ 0.01
RPS4XP62701 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 AL691403.2-201ENST00000618460 490 ntBASIC15.09■□□□□ 0.01
RPS4XP62701 AC005593.1-201ENST00000624894 515 ntBASIC15.09■□□□□ 0.01
RPS4XP62701 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RPS4XP62701 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.09■□□□□ 0.01
RPS4XP62701 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 AC005052.1-201ENST00000625181 2492 ntBASIC15.09■□□□□ 0.01
RPS4XP62701 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.09■□□□□ 0.01
RPS4XP62701 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RPS4XP62701 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.08■□□□□ 0.01
RPS4XP62701 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
RPS4XP62701 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RPS4XP62701 AL353732.1-201ENST00000569618 1459 ntBASIC15.08■□□□□ 0.01
RPS4XP62701 AP002414.3-201ENST00000589352 1468 ntBASIC15.08■□□□□ 0.01
RPS4XP62701 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
RPS4XP62701 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RPS4XP62701 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RPS4XP62701 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.08■□□□□ 0
RPS4XP62701 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RPS4XP62701 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPS4XP62701 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RPS4XP62701 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RPS4XP62701 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RPS4XP62701 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPS4XP62701 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RPS4XP62701 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.08■□□□□ 0
RPS4XP62701 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.08■□□□□ 0
RPS4XP62701 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
RPS4XP62701 DNAJB3-201ENST00000446806 729 ntBASIC15.08■□□□□ 0
RPS4XP62701 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms