Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
SEC61A1P61619 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.72□□□□□ -0.05
SEC61A1P61619 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.72□□□□□ -0.05
SEC61A1P61619 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEC61A1P61619 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.71□□□□□ -0.05
SEC61A1P61619 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.71□□□□□ -0.05
SEC61A1P61619 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SEC61A1P61619 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.71□□□□□ -0.05
SEC61A1P61619 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SEC61A1P61619 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SEC61A1P61619 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SEC61A1P61619 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.71□□□□□ -0.05
SEC61A1P61619 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.71□□□□□ -0.05
SEC61A1P61619 RBM17P3-201ENST00000417687 1192 ntBASIC14.71□□□□□ -0.05
SEC61A1P61619 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.71□□□□□ -0.05
SEC61A1P61619 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.71□□□□□ -0.05
SEC61A1P61619 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.71□□□□□ -0.05
SEC61A1P61619 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.71□□□□□ -0.05
SEC61A1P61619 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.71□□□□□ -0.05
SEC61A1P61619 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.71□□□□□ -0.05
SEC61A1P61619 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
SEC61A1P61619 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.71□□□□□ -0.05
SEC61A1P61619 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.71□□□□□ -0.05
SEC61A1P61619 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 AP005117.1-201ENST00000584346 1413 ntBASIC14.71□□□□□ -0.05
SEC61A1P61619 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.71□□□□□ -0.05
SEC61A1P61619 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
SEC61A1P61619 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
SEC61A1P61619 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
SEC61A1P61619 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEC61A1P61619 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.71□□□□□ -0.05
SEC61A1P61619 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
SEC61A1P61619 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
SEC61A1P61619 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SEC61A1P61619 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEC61A1P61619 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEC61A1P61619 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEC61A1P61619 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.71□□□□□ -0.06
SEC61A1P61619 AC116353.5-201ENST00000638148 1699 ntBASIC14.71□□□□□ -0.06
SEC61A1P61619 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SEC61A1P61619 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEC61A1P61619 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEC61A1P61619 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEC61A1P61619 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEC61A1P61619 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
SEC61A1P61619 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SEC61A1P61619 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.7□□□□□ -0.06
SEC61A1P61619 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 HLA-A-201ENST00000376802 1334 ntBASIC14.7□□□□□ -0.06
SEC61A1P61619 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SEC61A1P61619 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.7□□□□□ -0.06
SEC61A1P61619 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.7□□□□□ -0.06
SEC61A1P61619 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.7□□□□□ -0.06
SEC61A1P61619 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.7□□□□□ -0.06
SEC61A1P61619 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.7□□□□□ -0.06
SEC61A1P61619 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SEC61A1P61619 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.7□□□□□ -0.06
SEC61A1P61619 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.7□□□□□ -0.06
SEC61A1P61619 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SEC61A1P61619 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
SEC61A1P61619 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.7□□□□□ -0.06
SEC61A1P61619 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEC61A1P61619 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms