Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 AL139385.1-201ENST00000611744 3272 ntBASIC13.1□□□□□ -0.31
RAB5BP61020 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.1□□□□□ -0.31
RAB5BP61020 SUDS3P1-201ENST00000505831 966 ntBASIC13.1□□□□□ -0.31
RAB5BP61020 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.1□□□□□ -0.31
RAB5BP61020 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RAB5BP61020 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RAB5BP61020 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RAB5BP61020 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB5BP61020 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RAB5BP61020 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB5BP61020 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 CICP17-201ENST00000418553 2377 ntBASIC13.09□□□□□ -0.31
RAB5BP61020 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RAB5BP61020 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 REXO1L1P-202ENST00000608646 1974 ntBASIC13.09□□□□□ -0.31
RAB5BP61020 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB5BP61020 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 AC123595.1-201ENST00000440769 1046 ntBASIC13.09□□□□□ -0.31
RAB5BP61020 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.09□□□□□ -0.31
RAB5BP61020 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RAB5BP61020 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.09□□□□□ -0.31
RAB5BP61020 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.09□□□□□ -0.31
RAB5BP61020 AC005829.2-201ENST00000571422 1056 ntBASIC13.09□□□□□ -0.31
RAB5BP61020 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.09□□□□□ -0.31
RAB5BP61020 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.09□□□□□ -0.31
RAB5BP61020 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC13.09□□□□□ -0.31
RAB5BP61020 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 AC009102.3-201ENST00000623118 1491 ntBASIC13.09□□□□□ -0.31
RAB5BP61020 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RAB5BP61020 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RAB5BP61020 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RAB5BP61020 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAB5BP61020 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
RAB5BP61020 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.08□□□□□ -0.31
RAB5BP61020 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RAB5BP61020 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
RAB5BP61020 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RAB5BP61020 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB5BP61020 AC099343.3-201ENST00000605834 2503 ntBASIC13.08□□□□□ -0.32
RAB5BP61020 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB5BP61020 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RAB5BP61020 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms