Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 GRK6P1-201ENST00000400595 1711 ntBASIC13.06□□□□□ -0.32
ERVFC1-1P60608 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 MMP23A-201ENST00000234610 1017 ntBASIC13.06□□□□□ -0.32
ERVFC1-1P60608 UNC93B2-201ENST00000285383 730 ntBASIC13.06□□□□□ -0.32
ERVFC1-1P60608 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 NUDT16P1-203ENST00000513809 620 ntBASIC13.06□□□□□ -0.32
ERVFC1-1P60608 AP002490.2-201ENST00000524791 560 ntBASIC13.06□□□□□ -0.32
ERVFC1-1P60608 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 AL359258.3-201ENST00000622910 2331 ntBASIC13.06□□□□□ -0.32
ERVFC1-1P60608 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 ADM-208ENST00000534464 1640 ntTSL 2 BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
ERVFC1-1P60608 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 KRT18P21-201ENST00000515767 1272 ntBASIC13.05□□□□□ -0.32
ERVFC1-1P60608 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 AL391256.1-201ENST00000443260 1855 ntBASIC13.05□□□□□ -0.32
ERVFC1-1P60608 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
ERVFC1-1P60608 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
ERVFC1-1P60608 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms