Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
AP3S2P59780 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S2P59780 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
AP3S2P59780 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S2P59780 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S2P59780 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S2P59780 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.41□□□□□ -0.1
AP3S2P59780 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S2P59780 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.41□□□□□ -0.1
AP3S2P59780 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
AP3S2P59780 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S2P59780 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S2P59780 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.41□□□□□ -0.1
AP3S2P59780 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
AP3S2P59780 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
AP3S2P59780 TNRC18P2-201ENST00000417666 2714 ntBASIC14.4□□□□□ -0.1
AP3S2P59780 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
AP3S2P59780 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S2P59780 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.4□□□□□ -0.1
AP3S2P59780 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
AP3S2P59780 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S2P59780 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.4□□□□□ -0.1
AP3S2P59780 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.4□□□□□ -0.1
AP3S2P59780 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.4□□□□□ -0.1
AP3S2P59780 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
AP3S2P59780 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.4□□□□□ -0.1
AP3S2P59780 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.4□□□□□ -0.1
AP3S2P59780 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP3S2P59780 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.11
AP3S2P59780 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 AC023157.3-201ENST00000619086 2088 ntBASIC14.39□□□□□ -0.11
AP3S2P59780 UNC93B2-201ENST00000285383 730 ntBASIC14.39□□□□□ -0.11
AP3S2P59780 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AP3S2P59780 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 AC103564.2-201ENST00000432853 1299 ntBASIC14.39□□□□□ -0.11
AP3S2P59780 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AP3S2P59780 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 AC107956.1-201ENST00000494359 873 ntBASIC14.39□□□□□ -0.11
AP3S2P59780 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AP3S2P59780 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AP3S2P59780 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 AC013268.4-201ENST00000637413 2228 ntBASIC14.39□□□□□ -0.11
AP3S2P59780 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
AP3S2P59780 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
AP3S2P59780 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.39□□□□□ -0.11
AP3S2P59780 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.39□□□□□ -0.11
AP3S2P59780 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP3S2P59780 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.39□□□□□ -0.11
AP3S2P59780 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP3S2P59780 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms