Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.7□□□□□ -0.06
DEFA3P59666 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA3P59666 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
DEFA3P59666 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA3P59666 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 PTENP1-202ENST00000532280 3996 ntBASIC14.69□□□□□ -0.06
DEFA3P59666 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
DEFA3P59666 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.69□□□□□ -0.06
DEFA3P59666 KRT16P5-201ENST00000455284 522 ntBASIC14.69□□□□□ -0.06
DEFA3P59666 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.69□□□□□ -0.06
DEFA3P59666 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC14.69□□□□□ -0.06
DEFA3P59666 AC026271.3-201ENST00000571884 352 ntBASIC14.69□□□□□ -0.06
DEFA3P59666 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.69□□□□□ -0.06
DEFA3P59666 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.69□□□□□ -0.06
DEFA3P59666 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.69□□□□□ -0.06
DEFA3P59666 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
DEFA3P59666 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
DEFA3P59666 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
DEFA3P59666 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
DEFA3P59666 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.68□□□□□ -0.06
DEFA3P59666 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 SSR4P1-203ENST00000599569 2260 ntBASIC14.68□□□□□ -0.06
DEFA3P59666 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.68□□□□□ -0.06
DEFA3P59666 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
DEFA3P59666 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
DEFA3P59666 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
DEFA3P59666 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
DEFA3P59666 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.68□□□□□ -0.06
DEFA3P59666 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.68□□□□□ -0.06
DEFA3P59666 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC14.68□□□□□ -0.06
DEFA3P59666 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.68□□□□□ -0.06
DEFA3P59666 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.68□□□□□ -0.06
DEFA3P59666 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.68□□□□□ -0.06
DEFA3P59666 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
DEFA3P59666 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.68□□□□□ -0.06
DEFA3P59666 LINC00528-201ENST00000600723 2160 ntBASIC14.68□□□□□ -0.06
DEFA3P59666 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.68□□□□□ -0.06
DEFA3P59666 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 CICP14-201ENST00000629111 2732 ntBASIC14.68□□□□□ -0.06
DEFA3P59666 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.68□□□□□ -0.06
DEFA3P59666 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
DEFA3P59666 AL109954.1-202ENST00000564051 2148 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms