Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SUMO3P55854 PCGF3-213ENST00000620529 1899 ntBASIC15.11■□□□□ 0.01
SUMO3P55854 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.11■□□□□ 0.01
SUMO3P55854 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 CROCCP1-201ENST00000426910 5675 ntBASIC15.11■□□□□ 0.01
SUMO3P55854 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SUMO3P55854 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.11■□□□□ 0.01
SUMO3P55854 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SUMO3P55854 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SUMO3P55854 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SUMO3P55854 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SUMO3P55854 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.1■□□□□ 0.01
SUMO3P55854 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.1■□□□□ 0.01
SUMO3P55854 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 POU5F1P6-201ENST00000466990 990 ntBASIC15.1■□□□□ 0.01
SUMO3P55854 KRT18P34-201ENST00000488218 1270 ntBASIC15.1■□□□□ 0.01
SUMO3P55854 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.1■□□□□ 0.01
SUMO3P55854 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.1■□□□□ 0.01
SUMO3P55854 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.1■□□□□ 0.01
SUMO3P55854 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 AL671883.3-201ENST00000603274 991 ntBASIC15.1■□□□□ 0.01
SUMO3P55854 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.1■□□□□ 0.01
SUMO3P55854 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SUMO3P55854 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SUMO3P55854 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
SUMO3P55854 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SUMO3P55854 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SUMO3P55854 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SUMO3P55854 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SUMO3P55854 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
SUMO3P55854 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
SUMO3P55854 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
SUMO3P55854 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.09■□□□□ 0.01
SUMO3P55854 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SUMO3P55854 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SUMO3P55854 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
SUMO3P55854 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.09■□□□□ 0.01
SUMO3P55854 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.09■□□□□ 0.01
SUMO3P55854 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.09■□□□□ 0.01
SUMO3P55854 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
SUMO3P55854 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.09■□□□□ 0.01
SUMO3P55854 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.09■□□□□ 0.01
SUMO3P55854 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SUMO3P55854 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
SUMO3P55854 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
SUMO3P55854 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
SUMO3P55854 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.09■□□□□ 0.01
SUMO3P55854 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
SUMO3P55854 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
SUMO3P55854 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.08■□□□□ 0.01
SUMO3P55854 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SUMO3P55854 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
SUMO3P55854 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
SUMO3P55854 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0.01
SUMO3P55854 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SUMO3P55854 ME2P1-201ENST00000426028 1970 ntBASIC15.08■□□□□ 0
SUMO3P55854 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.08■□□□□ 0
SUMO3P55854 AC092919.2-201ENST00000623631 1645 ntBASIC15.08■□□□□ 0
SUMO3P55854 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SUMO3P55854 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
SUMO3P55854 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.08■□□□□ 0
SUMO3P55854 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.08■□□□□ 0
SUMO3P55854 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.08■□□□□ 0
SUMO3P55854 AC023274.1-201ENST00000418278 595 ntBASIC15.08■□□□□ 0
SUMO3P55854 AP000347.1-202ENST00000435868 847 ntBASIC15.08■□□□□ 0
SUMO3P55854 DNAJB3-201ENST00000446806 729 ntBASIC15.08■□□□□ 0
SUMO3P55854 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.08■□□□□ 0
SUMO3P55854 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms